These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

190 related articles for article (PubMed ID: 32315393)

  • 1. Testing hypotheses about the microbiome using the linear decomposition model (LDM).
    Hu YJ; Satten GA
    Bioinformatics; 2020 Aug; 36(14):4106-4115. PubMed ID: 32315393
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A new approach to testing mediation of the microbiome at both the community and individual taxon levels.
    Yue Y; Hu YJ
    Bioinformatics; 2022 Jun; 38(12):3173-3180. PubMed ID: 35512399
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Compositional analysis of microbiome data using the linear decomposition model (LDM).
    Hu YJ; Satten GA
    bioRxiv; 2023 May; ():. PubMed ID: 37398068
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Constraining PERMANOVA and LDM to within-set comparisons by projection improves the efficiency of analyses of matched sets of microbiome data.
    Zhu Z; Satten GA; Mitchell C; Hu YJ
    Microbiome; 2021 Jun; 9(1):133. PubMed ID: 34108046
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A rarefaction-based extension of the LDM for testing presence-absence associations in the microbiome.
    Hu YJ; Lane A; Satten GA
    Bioinformatics; 2021 Jul; 37(12):1652-1657. PubMed ID: 33479757
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Compositional analysis of microbiome data using the linear decomposition model (LDM).
    Hu YJ; Satten GA
    Bioinformatics; 2023 Nov; 39(11):. PubMed ID: 37930883
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Testing microbiome associations with survival times at both the community and individual taxon levels.
    Hu Y; Li Y; Satten GA; Hu YJ
    PLoS Comput Biol; 2022 Sep; 18(9):e1010509. PubMed ID: 36103548
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Integrative analysis of relative abundance data and presence-absence data of the microbiome using the LDM.
    Zhu Z; Satten GA; Hu YJ
    Bioinformatics; 2022 May; 38(10):2915-2917. PubMed ID: 35561163
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A rarefaction-without-resampling extension of PERMANOVA for testing presence-absence associations in the microbiome.
    Hu YJ; Satten GA
    Bioinformatics; 2022 Aug; 38(15):3689-3697. PubMed ID: 35723568
    [TBL] [Abstract][Full Text] [Related]  

  • 10. PERMANOVA-S: association test for microbial community composition that accommodates confounders and multiple distances.
    Tang ZZ; Chen G; Alekseyenko AV
    Bioinformatics; 2016 Sep; 32(17):2618-25. PubMed ID: 27197815
    [TBL] [Abstract][Full Text] [Related]  

  • 11. pldist: ecological dissimilarities for paired and longitudinal microbiome association analysis.
    Plantinga AM; Chen J; Jenq RR; Wu MC
    Bioinformatics; 2019 Oct; 35(19):3567-3575. PubMed ID: 30863868
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Transformation and differential abundance analysis of microbiome data incorporating phylogeny.
    Zhou C; Zhao H; Wang T
    Bioinformatics; 2021 Dec; 37(24):4652-4660. PubMed ID: 34302462
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Folic acid supplementation and malaria susceptibility and severity among people taking antifolate antimalarial drugs in endemic areas.
    Crider K; Williams J; Qi YP; Gutman J; Yeung L; Mai C; Finkelstain J; Mehta S; Pons-Duran C; Menéndez C; Moraleda C; Rogers L; Daniels K; Green P
    Cochrane Database Syst Rev; 2022 Feb; 2(2022):. PubMed ID: 36321557
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Extension of PERMANOVA to Testing the Mediation Effect of the Microbiome.
    Yue Y; Hu YJ
    Genes (Basel); 2022 May; 13(6):. PubMed ID: 35741702
    [TBL] [Abstract][Full Text] [Related]  

  • 15. TaxoNN: ensemble of neural networks on stratified microbiome data for disease prediction.
    Sharma D; Paterson AD; Xu W
    Bioinformatics; 2020 Nov; 36(17):4544-4550. PubMed ID: 32449747
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A two-stage microbial association mapping framework with advanced FDR control.
    Hu J; Koh H; He L; Liu M; Blaser MJ; Li H
    Microbiome; 2018 Jul; 6(1):131. PubMed ID: 30045760
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A distance-based approach for testing the mediation effect of the human microbiome.
    Zhang J; Wei Z; Chen J
    Bioinformatics; 2018 Jun; 34(11):1875-1883. PubMed ID: 29346509
    [TBL] [Abstract][Full Text] [Related]  

  • 18. False discovery rate control incorporating phylogenetic tree increases detection power in microbiome-wide multiple testing.
    Xiao J; Cao H; Chen J
    Bioinformatics; 2017 Sep; 33(18):2873-2881. PubMed ID: 28505251
    [TBL] [Abstract][Full Text] [Related]  

  • 19. An omnibus test for differential distribution analysis of microbiome sequencing data.
    Chen J; King E; Deek R; Wei Z; Yu Y; Grill D; Ballman K; Stegle O
    Bioinformatics; 2018 Feb; 34(4):643-651. PubMed ID: 29040451
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Phylogenetic tree-based microbiome association test.
    Kim KJ; Park J; Park SC; Won S
    Bioinformatics; 2020 Feb; 36(4):1000-1006. PubMed ID: 31504188
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.