These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

127 related articles for article (PubMed ID: 32317317)

  • 21. Optimized design of antisense oligomers for targeted rRNA depletion.
    Phelps WA; Carlson AE; Lee MT
    Nucleic Acids Res; 2021 Jan; 49(1):e5. PubMed ID: 33221877
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Scalable and cost-effective ribonuclease-based rRNA depletion for transcriptomics.
    Huang Y; Sheth RU; Kaufman A; Wang HH
    Nucleic Acids Res; 2020 Feb; 48(4):e20. PubMed ID: 31879761
    [TBL] [Abstract][Full Text] [Related]  

  • 23. A reverse transcriptase-mediated ribosomal RNA depletion (RTR2D) strategy for the cost-effective construction of RNA sequencing libraries.
    Zeng Z; Huang B; Wang X; Fan J; Zhang B; Yang L; Feng Y; Wu X; Luo H; Zhang J; Zhang M; He F; Mao Y; Pakvasa M; Wagstaff W; Li AJ; Liu B; Ding H; Zhang Y; Niu C; Wu M; Zhao X; Wolf JM; Lee MJ; Huang A; Luu HH; Haydon RC; He TC
    J Adv Res; 2020 Jul; 24():239-250. PubMed ID: 32373357
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Ribosomal RNA depletion for massively parallel bacterial RNA-sequencing applications.
    Chen Z; Duan X
    Methods Mol Biol; 2011; 733():93-103. PubMed ID: 21431765
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Organism-specific depletion of highly abundant RNA species from bacterial total RNA.
    Engelhardt F; Tomasch J; Häussler S
    Access Microbiol; 2020; 2(10):acmi000159. PubMed ID: 33195973
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Profiling of RNA editing events in plant organellar transcriptomes with high-throughput sequencing.
    Liu K; Xie B; Peng L; Wu Q; Hu J
    Plant J; 2024 Apr; 118(2):345-357. PubMed ID: 38149801
    [TBL] [Abstract][Full Text] [Related]  

  • 27. RNA-seq Sample Preparation Kits Strongly Affect Transcriptome Profiles of a Gas-Fermenting Bacterium.
    de Lima LA; Reinmets K; Nielsen LK; Marcellin E; Harris A; Köpke M; Valgepea K
    Microbiol Spectr; 2022 Aug; 10(4):e0230322. PubMed ID: 35894617
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Targeted rRNA depletion enables efficient mRNA sequencing in diverse bacterial species and complex co-cultures.
    Heom KA; Wangsanuwat C; Butkovich LV; Tam SC; Rowe AR; O'Malley MA; Dey SS
    mSystems; 2023 Dec; 8(6):e0028123. PubMed ID: 37855606
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Effective ribosomal RNA depletion for single-cell total RNA-seq by scDASH.
    Loi DSC; Yu L; Wu AR
    PeerJ; 2021; 9():e10717. PubMed ID: 33520469
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Evaluation of two main RNA-seq approaches for gene quantification in clinical RNA sequencing: polyA+ selection versus rRNA depletion.
    Zhao S; Zhang Y; Gamini R; Zhang B; von Schack D
    Sci Rep; 2018 Mar; 8(1):4781. PubMed ID: 29556074
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Duplex-specific nuclease efficiently removes rRNA for prokaryotic RNA-seq.
    Yi H; Cho YJ; Won S; Lee JE; Jin Yu H; Kim S; Schroth GP; Luo S; Chun J
    Nucleic Acids Res; 2011 Nov; 39(20):e140. PubMed ID: 21880599
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Selective Depletion of Abundant RNAs to Enable Transcriptome Analysis of Low-Input and Highly Degraded Human RNA.
    Munafó DB; Langhorst BW; Chater CL; Sumner CJ; Rodríguez DN; Russello S; Gardner AF; Slatko BE; Stewart FJ; Sinicropi D; Morlan J; Qu K; Dimalanta ET; Davis TB
    Curr Protoc Mol Biol; 2016 Jan; 113(1):7.22.1-7.22.9. PubMed ID: 31773915
    [TBL] [Abstract][Full Text] [Related]  

  • 33. A comparative analysis of library prep approaches for sequencing low input translatome samples.
    Song Y; Milon B; Ott S; Zhao X; Sadzewicz L; Shetty A; Boger ET; Tallon LJ; Morell RJ; Mahurkar A; Hertzano R
    BMC Genomics; 2018 Sep; 19(1):696. PubMed ID: 30241496
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Ribo-Pop: simple, cost-effective, and widely applicable ribosomal RNA depletion.
    Thompson MK; Kiourlappou M; Davis I
    RNA; 2020 Nov; 26(11):1731-1742. PubMed ID: 32759389
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Nuclease-mediated depletion biases in ribosome footprint profiling libraries.
    Zinshteyn B; Wangen JR; Hua B; Green R
    RNA; 2020 Oct; 26(10):1481-1488. PubMed ID: 32503920
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Ribo-ODDR: oligo design pipeline for experiment-specific rRNA depletion in Ribo-seq.
    Alkan F; Silva J; Pintó Barberà E; Faller WJ
    Bioinformatics; 2021 Sep; 37(17):2659-2667. PubMed ID: 33720291
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Enhancing the sensitivity of bacterial single-cell RNA sequencing using RamDA-seq and Cas9-based rRNA depletion.
    Nishimura M; Takeyama H; Hosokawa M
    J Biosci Bioeng; 2023 Aug; 136(2):152-158. PubMed ID: 37311684
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Selective and flexible depletion of problematic sequences from RNA-seq libraries at the cDNA stage.
    Archer SK; Shirokikh NE; Preiss T
    BMC Genomics; 2014 May; 15(1):401. PubMed ID: 24886553
    [TBL] [Abstract][Full Text] [Related]  

  • 39. A comparative analysis of RNA sequencing methods with ribosome RNA depletion for degraded and low-input total RNA from formalin-fixed and paraffin-embedded samples.
    Lin X; Qiu L; Song X; Hou J; Chen W; Zhao J
    BMC Genomics; 2019 Nov; 20(1):831. PubMed ID: 31703614
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Influence of RNA extraction methods and library selection schemes on RNA-seq data.
    Sultan M; Amstislavskiy V; Risch T; Schuette M; Dökel S; Ralser M; Balzereit D; Lehrach H; Yaspo ML
    BMC Genomics; 2014 Aug; 15(1):675. PubMed ID: 25113896
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.