BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

303 related articles for article (PubMed ID: 32333838)

  • 1. DNA Methylation Regulates Alternative Polyadenylation via CTCF and the Cohesin Complex.
    Nanavaty V; Abrash EW; Hong C; Park S; Fink EE; Li Z; Sweet TJ; Bhasin JM; Singuri S; Lee BH; Hwang TH; Ting AH
    Mol Cell; 2020 May; 78(4):752-764.e6. PubMed ID: 32333838
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CTCF mediates chromatin looping via N-terminal domain-dependent cohesin retention.
    Pugacheva EM; Kubo N; Loukinov D; Tajmul M; Kang S; Kovalchuk AL; Strunnikov AV; Zentner GE; Ren B; Lobanenkov VV
    Proc Natl Acad Sci U S A; 2020 Jan; 117(4):2020-2031. PubMed ID: 31937660
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins.
    Wutz G; Várnai C; Nagasaka K; Cisneros DA; Stocsits RR; Tang W; Schoenfelder S; Jessberger G; Muhar M; Hossain MJ; Walther N; Koch B; Kueblbeck M; Ellenberg J; Zuber J; Fraser P; Peters JM
    EMBO J; 2017 Dec; 36(24):3573-3599. PubMed ID: 29217591
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Disruption of CTCF/cohesin-mediated high-order chromatin structures by DNA methylation downregulates PTGS2 expression.
    Kang JY; Song SH; Yun J; Jeon MS; Kim HP; Han SW; Kim TY
    Oncogene; 2015 Nov; 34(45):5677-84. PubMed ID: 25703332
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Complex Interactions between Cohesin and CTCF in Regulation of Kaposi's Sarcoma-Associated Herpesvirus Lytic Transcription.
    Li D; Mosbruger T; Verma D; Swaminathan S
    J Virol; 2020 Jan; 94(2):. PubMed ID: 31666380
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Variable Extent of Lineage-Specificity and Developmental Stage-Specificity of Cohesin and CCCTC-Binding Factor Binding Within the Immunoglobulin and T Cell Receptor Loci.
    Loguercio S; Barajas-Mora EM; Shih HY; Krangel MS; Feeney AJ
    Front Immunol; 2018; 9():425. PubMed ID: 29593713
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genome-wide and parental allele-specific analysis of CTCF and cohesin DNA binding in mouse brain reveals a tissue-specific binding pattern and an association with imprinted differentially methylated regions.
    Prickett AR; Barkas N; McCole RB; Hughes S; Amante SM; Schulz R; Oakey RJ
    Genome Res; 2013 Oct; 23(10):1624-35. PubMed ID: 23804403
    [TBL] [Abstract][Full Text] [Related]  

  • 8. CTCF as a boundary factor for cohesin-mediated loop extrusion: evidence for a multi-step mechanism.
    Hansen AS
    Nucleus; 2020 Dec; 11(1):132-148. PubMed ID: 32631111
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Opposing Effects of Cohesin and Transcription on CTCF Organization Revealed by Super-resolution Imaging.
    Gu B; Comerci CJ; McCarthy DG; Saurabh S; Moerner WE; Wysocka J
    Mol Cell; 2020 Nov; 80(4):699-711.e7. PubMed ID: 33091336
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Topoisomerase II beta interacts with cohesin and CTCF at topological domain borders.
    Uusküla-Reimand L; Hou H; Samavarchi-Tehrani P; Rudan MV; Liang M; Medina-Rivera A; Mohammed H; Schmidt D; Schwalie P; Young EJ; Reimand J; Hadjur S; Gingras AC; Wilson MD
    Genome Biol; 2016 Aug; 17(1):182. PubMed ID: 27582050
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Absolute quantification of cohesin, CTCF and their regulators in human cells.
    Holzmann J; Politi AZ; Nagasaka K; Hantsche-Grininger M; Walther N; Koch B; Fuchs J; Dürnberger G; Tang W; Ladurner R; Stocsits RR; Busslinger GA; Novák B; Mechtler K; Davidson IF; Ellenberg J; Peters JM
    Elife; 2019 Jun; 8():. PubMed ID: 31204999
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Interplay between CTCF boundaries and a super enhancer controls cohesin extrusion trajectories and gene expression.
    Vos ESM; Valdes-Quezada C; Huang Y; Allahyar A; Verstegen MJAM; Felder AK; van der Vegt F; Uijttewaal ECH; Krijger PHL; de Laat W
    Mol Cell; 2021 Aug; 81(15):3082-3095.e6. PubMed ID: 34197738
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Cohesin is positioned in mammalian genomes by transcription, CTCF and Wapl.
    Busslinger GA; Stocsits RR; van der Lelij P; Axelsson E; Tedeschi A; Galjart N; Peters JM
    Nature; 2017 Apr; 544(7651):503-507. PubMed ID: 28424523
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Functional Mutations Form at CTCF-Cohesin Binding Sites in Melanoma Due to Uneven Nucleotide Excision Repair across the Motif.
    Poulos RC; Thoms JAI; Guan YF; Unnikrishnan A; Pimanda JE; Wong JWH
    Cell Rep; 2016 Dec; 17(11):2865-2872. PubMed ID: 27974201
    [TBL] [Abstract][Full Text] [Related]  

  • 15. HOTTIP-dependent R-loop formation regulates CTCF boundary activity and TAD integrity in leukemia.
    Luo H; Zhu G; Eshelman MA; Fung TK; Lai Q; Wang F; Zeisig BB; Lesperance J; Ma X; Chen S; Cesari N; Cogle C; Chen B; Xu B; Yang FC; So CWE; Qiu Y; Xu M; Huang S
    Mol Cell; 2022 Feb; 82(4):833-851.e11. PubMed ID: 35180428
    [TBL] [Abstract][Full Text] [Related]  

  • 16. A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection.
    Deng Z; Wang Z; Stong N; Plasschaert R; Moczan A; Chen HS; Hu S; Wikramasinghe P; Davuluri RV; Bartolomei MS; Riethman H; Lieberman PM
    EMBO J; 2012 Nov; 31(21):4165-78. PubMed ID: 23010778
    [TBL] [Abstract][Full Text] [Related]  

  • 17. CTCF: a Swiss-army knife for genome organization and transcription regulation.
    Braccioli L; de Wit E
    Essays Biochem; 2019 Apr; 63(1):157-165. PubMed ID: 30940740
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The structural basis for cohesin-CTCF-anchored loops.
    Li Y; Haarhuis JHI; Sedeño Cacciatore Á; Oldenkamp R; van Ruiten MS; Willems L; Teunissen H; Muir KW; de Wit E; Rowland BD; Panne D
    Nature; 2020 Feb; 578(7795):472-476. PubMed ID: 31905366
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genome-wide studies of CCCTC-binding factor (CTCF) and cohesin provide insight into chromatin structure and regulation.
    Lee BK; Iyer VR
    J Biol Chem; 2012 Sep; 287(37):30906-13. PubMed ID: 22952237
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells.
    Zuin J; Dixon JR; van der Reijden MI; Ye Z; Kolovos P; Brouwer RW; van de Corput MP; van de Werken HJ; Knoch TA; van IJcken WF; Grosveld FG; Ren B; Wendt KS
    Proc Natl Acad Sci U S A; 2014 Jan; 111(3):996-1001. PubMed ID: 24335803
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.