These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

155 related articles for article (PubMed ID: 32343706)

  • 1. Predicting cell lineages using autoencoders and optimal transport.
    Yang KD; Damodaran K; Venkatachalapathy S; Soylemezoglu AC; Shivashankar GV; Uhler C
    PLoS Comput Biol; 2020 Apr; 16(4):e1007828. PubMed ID: 32343706
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Single cell imaging-based chromatin biomarkers for tumor progression.
    Venkatachalapathy S; Jokhun DS; Andhari M; Shivashankar GV
    Sci Rep; 2021 Nov; 11(1):23041. PubMed ID: 34845273
    [TBL] [Abstract][Full Text] [Related]  

  • 3. In silico lineage tracing through single cell transcriptomics identifies a neural stem cell population in planarians.
    Molinaro AM; Pearson BJ
    Genome Biol; 2016 Apr; 17():87. PubMed ID: 27150006
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Hidden heterogeneity and circadian-controlled cell fate inferred from single cell lineages.
    Chakrabarti S; Paek AL; Reyes J; Lasick KA; Lahav G; Michor F
    Nat Commun; 2018 Dec; 9(1):5372. PubMed ID: 30560953
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Transformation of Accessible Chromatin and 3D Nucleome Underlies Lineage Commitment of Early T Cells.
    Hu G; Cui K; Fang D; Hirose S; Wang X; Wangsa D; Jin W; Ried T; Liu P; Zhu J; Rothenberg EV; Zhao K
    Immunity; 2018 Feb; 48(2):227-242.e8. PubMed ID: 29466755
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A computational strategy for predicting lineage specifiers in stem cell subpopulations.
    Okawa S; del Sol A
    Stem Cell Res; 2015 Sep; 15(2):427-34. PubMed ID: 26368290
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Constructing cell lineages from single-cell transcriptomes.
    Chen J; Rénia L; Ginhoux F
    Mol Aspects Med; 2018 Feb; 59():95-113. PubMed ID: 29107741
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Lineage Inference and Stem Cell Identity Prediction Using Single-Cell RNA-Sequencing Data.
    Sagar ; Grün D
    Methods Mol Biol; 2019; 1975():277-301. PubMed ID: 31062315
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Intraclonal Plasticity in Mammary Tumors Revealed through Large-Scale Single-Cell Resolution 3D Imaging.
    Rios AC; Capaldo BD; Vaillant F; Pal B; van Ineveld R; Dawson CA; Chen Y; Nolan E; Fu NY; ; Jackling FC; Devi S; Clouston D; Whitehead L; Smyth GK; Mueller SN; Lindeman GJ; Visvader JE
    Cancer Cell; 2019 Apr; 35(4):618-632.e6. PubMed ID: 30930118
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Discovering New Progenitor Cell Populations through Lineage Tracing and In Vivo Imaging.
    Das RN; Yaniv K
    Cold Spring Harb Perspect Biol; 2020 Oct; 12(10):. PubMed ID: 32041709
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Computational Tools for Quantifying Concordance in Single-Cell Fate.
    Cornwell JA; Nordon RE
    Methods Mol Biol; 2019; 1975():131-156. PubMed ID: 31062308
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Concepts and limitations for learning developmental trajectories from single cell genomics.
    Tritschler S; Büttner M; Fischer DS; Lange M; Bergen V; Lickert H; Theis FJ
    Development; 2019 Jun; 146(12):. PubMed ID: 31249007
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Comprehensive single cell-resolution analysis of the role of chromatin regulators in early C. elegans embryogenesis.
    Krüger AV; Jelier R; Dzyubachyk O; Zimmerman T; Meijering E; Lehner B
    Dev Biol; 2015 Feb; 398(2):153-62. PubMed ID: 25446273
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Trajectory Algorithms to Infer Stem Cell Fate Decisions.
    Lummertz da Rocha E; Malleshaiah M
    Methods Mol Biol; 2019; 1975():193-209. PubMed ID: 31062311
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Nuclear morphometrics and chromatin condensation patterns as disease biomarkers using a mobile microscope.
    Damodaran K; Crestani M; Jokhun DS; Shivashankar GV
    PLoS One; 2019; 14(7):e0218757. PubMed ID: 31314779
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Cell lineage and communication network inference via optimization for single-cell transcriptomics.
    Wang S; Karikomi M; MacLean AL; Nie Q
    Nucleic Acids Res; 2019 Jun; 47(11):e66. PubMed ID: 30923815
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Evolution of cellular morpho-phenotypes in cancer metastasis.
    Wu PH; Phillip JM; Khatau SB; Chen WC; Stirman J; Rosseel S; Tschudi K; Van Patten J; Wong M; Gupta S; Baras AS; Leek JT; Maitra A; Wirtz D
    Sci Rep; 2015 Dec; 5():18437. PubMed ID: 26675084
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Large-scale tracking and classification for automatic analysis of cell migration and proliferation, and experimental optimization of high-throughput screens of neuroblastoma cells.
    Harder N; Batra R; Diessl N; Gogolin S; Eils R; Westermann F; König R; Rohr K
    Cytometry A; 2015 Jun; 87(6):524-40. PubMed ID: 25630981
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Learning unsupervised feature representations for single cell microscopy images with paired cell inpainting.
    Lu AX; Kraus OZ; Cooper S; Moses AM
    PLoS Comput Biol; 2019 Sep; 15(9):e1007348. PubMed ID: 31479439
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Analysis of in vivo single cell behavior by high throughput, human-in-the-loop segmentation of three-dimensional images.
    Chiang M; Hallman S; Cinquin A; de Mochel NR; Paz A; Kawauchi S; Calof AL; Cho KW; Fowlkes CC; Cinquin O
    BMC Bioinformatics; 2015 Nov; 16():397. PubMed ID: 26607933
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.