BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

168 related articles for article (PubMed ID: 32348312)

  • 1. Inferring the immune response from repertoire sequencing.
    Puelma Touzel M; Walczak AM; Mora T
    PLoS Comput Biol; 2020 Apr; 16(4):e1007873. PubMed ID: 32348312
    [TBL] [Abstract][Full Text] [Related]  

  • 2. NoisET: Noise Learning and Expansion Detection of T-Cell Receptors.
    Koraichi MB; Touzel MP; Mazzolini A; Mora T; Walczak AM
    J Phys Chem A; 2022 Oct; 126(40):7407-7414. PubMed ID: 36178325
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Inferring the T cell repertoire dynamics of healthy individuals.
    Bensouda Koraichi M; Ferri S; Walczak AM; Mora T
    Proc Natl Acad Sci U S A; 2023 Jan; 120(4):e2207516120. PubMed ID: 36669107
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Primary and secondary anti-viral response captured by the dynamics and phenotype of individual T cell clones.
    Minervina AA; Pogorelyy MV; Komech EA; Karnaukhov VK; Bacher P; Rosati E; Franke A; Chudakov DM; Mamedov IZ; Lebedev YB; Mora T; Walczak AM
    Elife; 2020 Feb; 9():. PubMed ID: 32081129
    [TBL] [Abstract][Full Text] [Related]  

  • 5. FB5P-seq: FACS-Based 5-Prime End Single-Cell RNA-seq for Integrative Analysis of Transcriptome and Antigen Receptor Repertoire in B and T Cells.
    Attaf N; Cervera-Marzal I; Dong C; Gil L; Renand A; Spinelli L; Milpied P
    Front Immunol; 2020; 11():216. PubMed ID: 32194545
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Single-cell immune repertoire analysis.
    Irac SE; Soon MSF; Borcherding N; Tuong ZK
    Nat Methods; 2024 May; 21(5):777-792. PubMed ID: 38637691
    [TBL] [Abstract][Full Text] [Related]  

  • 7. IRProfiler - a software toolbox for high throughput immune receptor profiling.
    Maramis C; Gkoufas A; Vardi A; Stalika E; Stamatopoulos K; Hatzidimitriou A; Maglaveras N; Chouvarda I
    BMC Bioinformatics; 2018 Apr; 19(1):144. PubMed ID: 29669518
    [TBL] [Abstract][Full Text] [Related]  

  • 8. T and B Cell Receptor Immune Repertoire Analysis using Next-generation Sequencing.
    Werner L; Dor C; Salamon N; Nagar M; Shouval DS
    J Vis Exp; 2021 Jan; (167):. PubMed ID: 33522509
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Learning the High-Dimensional Immunogenomic Features That Predict Public and Private Antibody Repertoires.
    Greiff V; Weber CR; Palme J; Bodenhofer U; Miho E; Menzel U; Reddy ST
    J Immunol; 2017 Oct; 199(8):2985-2997. PubMed ID: 28924003
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Analyzing Immunoglobulin Repertoires.
    Chaudhary N; Wesemann DR
    Front Immunol; 2018; 9():462. PubMed ID: 29593723
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Network properties derived from deep sequencing of human B-cell receptor repertoires delineate B-cell populations.
    Bashford-Rogers RJ; Palser AL; Huntly BJ; Rance R; Vassiliou GS; Follows GA; Kellam P
    Genome Res; 2013 Nov; 23(11):1874-84. PubMed ID: 23742949
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Vaccination reshapes the virus-specific T cell repertoire in unexposed adults.
    Pan YG; Aiamkitsumrit B; Bartolo L; Wang Y; Lavery C; Marc A; Holec PV; Rappazzo CG; Eilola T; Gimotty PA; Hensley SE; Antia R; Zarnitsyna VI; Birnbaum ME; Su LF
    Immunity; 2021 Jun; 54(6):1245-1256.e5. PubMed ID: 34004140
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Clonal distribution and intratumour heterogeneity of the B-cell repertoire in oesophageal squamous cell carcinoma.
    Zhang C; Huang H; Miao Y; Xiong H; Lu Z
    J Pathol; 2018 Nov; 246(3):323-330. PubMed ID: 30027584
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Next-generation sequencing analysis of the human T-cell and B-cell receptor repertoire diversity before and after hepatitis B vaccination.
    Miyasaka A; Yoshida Y; Wang T; Takikawa Y
    Hum Vaccin Immunother; 2019; 15(11):2738-2753. PubMed ID: 30945971
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A comprehensive profiling of T- and B-lymphocyte receptor repertoires from a Chinese-origin rhesus macaque by high-throughput sequencing.
    Fu L; Li X; Zhang W; Wang C; Wu J; Yang H; Wang J; Liu X
    PLoS One; 2017; 12(8):e0182733. PubMed ID: 28813462
    [TBL] [Abstract][Full Text] [Related]  

  • 16. High-throughput targeted long-read single cell sequencing reveals the clonal and transcriptional landscape of lymphocytes.
    Singh M; Al-Eryani G; Carswell S; Ferguson JM; Blackburn J; Barton K; Roden D; Luciani F; Giang Phan T; Junankar S; Jackson K; Goodnow CC; Smith MA; Swarbrick A
    Nat Commun; 2019 Jul; 10(1):3120. PubMed ID: 31311926
    [TBL] [Abstract][Full Text] [Related]  

  • 17. High-throughput immune repertoire analysis with IGoR.
    Marcou Q; Mora T; Walczak AM
    Nat Commun; 2018 Feb; 9(1):561. PubMed ID: 29422654
    [TBL] [Abstract][Full Text] [Related]  

  • 18. ClonoCalc and ClonoPlot: immune repertoire analysis from raw files to publication figures with graphical user interface.
    Fähnrich A; Krebbel M; Decker N; Leucker M; Lange FD; Kalies K; Möller S
    BMC Bioinformatics; 2017 Mar; 18(1):164. PubMed ID: 28284194
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Longitudinal Analysis of T and B Cell Receptor Repertoire Transcripts Reveal Dynamic Immune Response in COVID-19 Patients.
    Niu X; Li S; Li P; Pan W; Wang Q; Feng Y; Mo X; Yan Q; Ye X; Luo J; Qu L; Weber D; Byrne-Steele ML; Wang Z; Yu F; Li F; Myers RM; Lotze MT; Zhong N; Han J; Chen L
    Front Immunol; 2020; 11():582010. PubMed ID: 33117392
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The CAIRR Pipeline for Submitting Standards-Compliant B and T Cell Receptor Repertoire Sequencing Studies to the National Center for Biotechnology Information Repositories.
    Bukhari SAC; O'Connor MJ; Martínez-Romero M; Egyedi AL; Willrett D; Graybeal J; Musen MA; Rubelt F; Cheung KH; Kleinstein SH
    Front Immunol; 2018; 9():1877. PubMed ID: 30166985
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.