231 related articles for article (PubMed ID: 32374785)
1. Multifaceted analysis of training and testing convolutional neural networks for protein secondary structure prediction.
Shapovalov M; Dunbrack RL; Vucetic S
PLoS One; 2020; 15(5):e0232528. PubMed ID: 32374785
[TBL] [Abstract][Full Text] [Related]
2. MUFOLD-SS: New deep inception-inside-inception networks for protein secondary structure prediction.
Fang C; Shang Y; Xu D
Proteins; 2018 May; 86(5):592-598. PubMed ID: 29492997
[TBL] [Abstract][Full Text] [Related]
3. IGPRED-MultiTask: A Deep Learning Model to Predict Protein Secondary Structure, Torsion Angles and Solvent Accessibility.
Gormez Y; Aydin Z
IEEE/ACM Trans Comput Biol Bioinform; 2023; 20(2):1104-1113. PubMed ID: 35849663
[TBL] [Abstract][Full Text] [Related]
4. DNSS2: Improved ab initio protein secondary structure prediction using advanced deep learning architectures.
Guo Z; Hou J; Cheng J
Proteins; 2021 Feb; 89(2):207-217. PubMed ID: 32893403
[TBL] [Abstract][Full Text] [Related]
5. Prediction of 8-state protein secondary structures by a novel deep learning architecture.
Zhang B; Li J; Lü Q
BMC Bioinformatics; 2018 Aug; 19(1):293. PubMed ID: 30075707
[TBL] [Abstract][Full Text] [Related]
6. MFTrans: A multi-feature transformer network for protein secondary structure prediction.
Chen Y; Chen G; Chen CY
Int J Biol Macromol; 2024 May; 267(Pt 1):131311. PubMed ID: 38599417
[TBL] [Abstract][Full Text] [Related]
7. SAINT: self-attention augmented inception-inside-inception network improves protein secondary structure prediction.
Uddin MR; Mahbub S; Rahman MS; Bayzid MS
Bioinformatics; 2020 Nov; 36(17):4599-4608. PubMed ID: 32437517
[TBL] [Abstract][Full Text] [Related]
8. Predicting dihedral angle probability distributions for protein coil residues from primary sequence using neural networks.
Helles G; Fonseca R
BMC Bioinformatics; 2009 Oct; 10():338. PubMed ID: 19835576
[TBL] [Abstract][Full Text] [Related]
9. Protein secondary structure prediction with SPARROW.
Bettella F; Rasinski D; Knapp EW
J Chem Inf Model; 2012 Feb; 52(2):545-56. PubMed ID: 22224407
[TBL] [Abstract][Full Text] [Related]
10. Protein 8-class secondary structure prediction using conditional neural fields.
Wang Z; Zhao F; Peng J; Xu J
Proteomics; 2011 Oct; 11(19):3786-92. PubMed ID: 21805636
[TBL] [Abstract][Full Text] [Related]
11. DeepACLSTM: deep asymmetric convolutional long short-term memory neural models for protein secondary structure prediction.
Guo Y; Li W; Wang B; Liu H; Zhou D
BMC Bioinformatics; 2019 Jun; 20(1):341. PubMed ID: 31208331
[TBL] [Abstract][Full Text] [Related]
12. Lightweight ProteinUnet2 network for protein secondary structure prediction: a step towards proper evaluation.
Stapor K; Kotowski K; Smolarczyk T; Roterman I
BMC Bioinformatics; 2022 Mar; 23(1):100. PubMed ID: 35317722
[TBL] [Abstract][Full Text] [Related]
13. Predicting protein-ligand binding residues with deep convolutional neural networks.
Cui Y; Dong Q; Hong D; Wang X
BMC Bioinformatics; 2019 Feb; 20(1):93. PubMed ID: 30808287
[TBL] [Abstract][Full Text] [Related]
14. Effective Local and Secondary Protein Structure Prediction by Combining a Neural Network-Based Approach with Extensive Feature Design and Selection without Reliance on Evolutionary Information.
Milchevskiy YV; Milchevskaya VY; Nikitin AM; Kravatsky YV
Int J Mol Sci; 2023 Oct; 24(21):. PubMed ID: 37958639
[TBL] [Abstract][Full Text] [Related]
15. Deeper Profiles and Cascaded Recurrent and Convolutional Neural Networks for state-of-the-art Protein Secondary Structure Prediction.
Torrisi M; Kaleel M; Pollastri G
Sci Rep; 2019 Aug; 9(1):12374. PubMed ID: 31451723
[TBL] [Abstract][Full Text] [Related]
16. CNNH_PSS: protein 8-class secondary structure prediction by convolutional neural network with highway.
Zhou J; Wang H; Zhao Z; Xu R; Lu Q
BMC Bioinformatics; 2018 May; 19(Suppl 4):60. PubMed ID: 29745837
[TBL] [Abstract][Full Text] [Related]
17. PS4: a next-generation dataset for protein single-sequence secondary structure prediction.
Peracha O
Biotechniques; 2024 Feb; 76(2):63-70. PubMed ID: 37997848
[TBL] [Abstract][Full Text] [Related]
18. OPUS-TASS: a protein backbone torsion angles and secondary structure predictor based on ensemble neural networks.
Xu G; Wang Q; Ma J
Bioinformatics; 2020 Dec; 36(20):5021-5026. PubMed ID: 32678893
[TBL] [Abstract][Full Text] [Related]
19. DeepECA: an end-to-end learning framework for protein contact prediction from a multiple sequence alignment.
Fukuda H; Tomii K
BMC Bioinformatics; 2020 Jan; 21(1):10. PubMed ID: 31918654
[TBL] [Abstract][Full Text] [Related]
20. PCI-SS: MISO dynamic nonlinear protein secondary structure prediction.
Green JR; Korenberg MJ; Aboul-Magd MO
BMC Bioinformatics; 2009 Jul; 10():222. PubMed ID: 19615046
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]