These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

160 related articles for article (PubMed ID: 32393825)

  • 1. ORF Capture-Seq as a versatile method for targeted identification of full-length isoforms.
    Sheynkman GM; Tuttle KS; Laval F; Tseng E; Underwood JG; Yu L; Dong D; Smith ML; Sebra R; Willems L; Hao T; Calderwood MA; Hill DE; Vidal M
    Nat Commun; 2020 May; 11(1):2326. PubMed ID: 32393825
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Comparative analysis of human protein-coding and noncoding RNAs between brain and 10 mixed cell lines by RNA-Seq.
    Chen G; Yin K; Shi L; Fang Y; Qi Y; Li P; Luo J; He B; Liu M; Shi T
    PLoS One; 2011; 6(11):e28318. PubMed ID: 22140575
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Full-length transcriptome reconstruction reveals a large diversity of RNA and protein isoforms in rat hippocampus.
    Wang X; You X; Langer JD; Hou J; Rupprecht F; Vlatkovic I; Quedenau C; Tushev G; Epstein I; Schaefke B; Sun W; Fang L; Li G; Hu Y; Schuman EM; Chen W
    Nat Commun; 2019 Nov; 10(1):5009. PubMed ID: 31676752
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Dual isoform sequencing reveals complex transcriptomic and epitranscriptomic landscapes of a prototype baculovirus.
    Torma G; Tombácz D; Moldován N; Fülöp Á; Prazsák I; Csabai Z; Snyder M; Boldogkői Z
    Sci Rep; 2022 Jan; 12(1):1291. PubMed ID: 35079129
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing.
    Hoang NV; Furtado A; Mason PJ; Marquardt A; Kasirajan L; Thirugnanasambandam PP; Botha FC; Henry RJ
    BMC Genomics; 2017 May; 18(1):395. PubMed ID: 28532419
    [TBL] [Abstract][Full Text] [Related]  

  • 6. NSMAP: a method for spliced isoforms identification and quantification from RNA-Seq.
    Xia Z; Wen J; Chang CC; Zhou X
    BMC Bioinformatics; 2011 May; 12():162. PubMed ID: 21575225
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A global survey of the transcriptome of allopolyploid Brassica napus based on single-molecule long-read isoform sequencing and Illumina-based RNA sequencing data.
    Yao S; Liang F; Gill RA; Huang J; Cheng X; Liu Y; Tong C; Liu S
    Plant J; 2020 Jul; 103(2):843-857. PubMed ID: 32270540
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Improved transcript isoform discovery using ORF graphs.
    Majoros WH; Lebeck N; Ohler U; Li S
    Bioinformatics; 2014 Jul; 30(14):1958-64. PubMed ID: 24659106
    [TBL] [Abstract][Full Text] [Related]  

  • 9. TEQUILA-seq: a versatile and low-cost method for targeted long-read RNA sequencing.
    Wang F; Xu Y; Wang R; Zhang B; Smith N; Notaro A; Gaerlan S; Kutschera E; Kadash-Edmondson KE; Xing Y; Lin L
    Nat Commun; 2023 Aug; 14(1):4760. PubMed ID: 37553321
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Bayesian nonparametric discovery of isoforms and individual specific quantification.
    Aguiar D; Cheng LF; Dumitrascu B; Mordelet F; Pai AA; Engelhardt BE
    Nat Commun; 2018 Apr; 9(1):1681. PubMed ID: 29703885
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Proteomic Validation of Transcript Isoforms, Including Those Assembled from RNA-Seq Data.
    Tay AP; Pang CN; Twine NA; Hart-Smith G; Harkness L; Kassem M; Wilkins MR
    J Proteome Res; 2015 Sep; 14(9):3541-54. PubMed ID: 25961807
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Sparse linear modeling of next-generation mRNA sequencing (RNA-Seq) data for isoform discovery and abundance estimation.
    Li JJ; Jiang CR; Brown JB; Huang H; Bickel PJ
    Proc Natl Acad Sci U S A; 2011 Dec; 108(50):19867-72. PubMed ID: 22135461
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Reconstruction of full-length circular RNAs enables isoform-level quantification.
    Zheng Y; Ji P; Chen S; Hou L; Zhao F
    Genome Med; 2019 Jan; 11(1):2. PubMed ID: 30660194
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The human olfactory transcriptome.
    Olender T; Keydar I; Pinto JM; Tatarskyy P; Alkelai A; Chien MS; Fishilevich S; Restrepo D; Matsunami H; Gilad Y; Lancet D
    BMC Genomics; 2016 Aug; 17(1):619. PubMed ID: 27515280
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Genome-wide identification of transcript start and end sites by transcript isoform sequencing.
    Pelechano V; Wei W; Jakob P; Steinmetz LM
    Nat Protoc; 2014 Jul; 9(7):1740-59. PubMed ID: 24967623
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Extension of human lncRNA transcripts by RACE coupled with long-read high-throughput sequencing (RACE-Seq).
    Lagarde J; Uszczynska-Ratajczak B; Santoyo-Lopez J; Gonzalez JM; Tapanari E; Mudge JM; Steward CA; Wilming L; Tanzer A; Howald C; Chrast J; Vela-Boza A; Rueda A; Lopez-Domingo FJ; Dopazo J; Reymond A; Guigó R; Harrow J
    Nat Commun; 2016 Aug; 7():12339. PubMed ID: 27531712
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Quantification of translation uncovers the functions of the alternative transcriptome.
    Calviello L; Hirsekorn A; Ohler U
    Nat Struct Mol Biol; 2020 Aug; 27(8):717-725. PubMed ID: 32601440
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Long-read sequencing uncovers a complex transcriptome topology in varicella zoster virus.
    Prazsák I; Moldován N; Balázs Z; Tombácz D; Megyeri K; Szűcs A; Csabai Z; Boldogkői Z
    BMC Genomics; 2018 Dec; 19(1):873. PubMed ID: 30514211
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Isoform diversity and regulation in peripheral and central neurons revealed through RNA-Seq.
    Lerch JK; Kuo F; Motti D; Morris R; Bixby JL; Lemmon VP
    PLoS One; 2012; 7(1):e30417. PubMed ID: 22272348
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Diversity of translation start sites may define increased complexity of the human short ORFeome.
    Oyama M; Kozuka-Hata H; Suzuki Y; Semba K; Yamamoto T; Sugano S
    Mol Cell Proteomics; 2007 Jun; 6(6):1000-6. PubMed ID: 17317662
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.