294 related articles for article (PubMed ID: 32483332)
1. Targeted Perturb-seq enables genome-scale genetic screens in single cells.
Schraivogel D; Gschwind AR; Milbank JH; Leonce DR; Jakob P; Mathur L; Korbel JO; Merten CA; Velten L; Steinmetz LM
Nat Methods; 2020 Jun; 17(6):629-635. PubMed ID: 32483332
[TBL] [Abstract][Full Text] [Related]
2. Pooled CRISPR screening with single-cell transcriptome readout.
Datlinger P; Rendeiro AF; Schmidl C; Krausgruber T; Traxler P; Klughammer J; Schuster LC; Kuchler A; Alpar D; Bock C
Nat Methods; 2017 Mar; 14(3):297-301. PubMed ID: 28099430
[TBL] [Abstract][Full Text] [Related]
3. Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens.
Dixit A; Parnas O; Li B; Chen J; Fulco CP; Jerby-Arnon L; Marjanovic ND; Dionne D; Burks T; Raychowdhury R; Adamson B; Norman TM; Lander ES; Weissman JS; Friedman N; Regev A
Cell; 2016 Dec; 167(7):1853-1866.e17. PubMed ID: 27984732
[TBL] [Abstract][Full Text] [Related]
4. A Multiplexed Single-Cell CRISPR Screening Platform Enables Systematic Dissection of the Unfolded Protein Response.
Adamson B; Norman TM; Jost M; Cho MY; Nuñez JK; Chen Y; Villalta JE; Gilbert LA; Horlbeck MA; Hein MY; Pak RA; Gray AN; Gross CA; Dixit A; Parnas O; Regev A; Weissman JS
Cell; 2016 Dec; 167(7):1867-1882.e21. PubMed ID: 27984733
[TBL] [Abstract][Full Text] [Related]
5. Profiling the genetic determinants of chromatin accessibility with scalable single-cell CRISPR screens.
Liscovitch-Brauer N; Montalbano A; Deng J; Méndez-Mancilla A; Wessels HH; Moss NG; Kung CY; Sookdeo A; Guo X; Geller E; Jaini S; Smibert P; Sanjana NE
Nat Biotechnol; 2021 Oct; 39(10):1270-1277. PubMed ID: 33927415
[TBL] [Abstract][Full Text] [Related]
6. Detection of gene cis-regulatory element perturbations in single-cell transcriptomes.
Yeo GHT; Juez O; Chen Q; Banerjee B; Chu L; Shen MW; Sabry M; Logister I; Sherwood RI; Gifford DK
PLoS Comput Biol; 2021 Mar; 17(3):e1008789. PubMed ID: 33711017
[TBL] [Abstract][Full Text] [Related]
7. Pooled CRISPR-activation screening coupled with single-cell RNA-seq in mouse embryonic stem cells.
Alda-Catalinas C; Eckersley-Maslin MA; Reik W
STAR Protoc; 2021 Jun; 2(2):100426. PubMed ID: 33899013
[TBL] [Abstract][Full Text] [Related]
8. Ultra-high-throughput single-cell RNA sequencing and perturbation screening with combinatorial fluidic indexing.
Datlinger P; Rendeiro AF; Boenke T; Senekowitsch M; Krausgruber T; Barreca D; Bock C
Nat Methods; 2021 Jun; 18(6):635-642. PubMed ID: 34059827
[TBL] [Abstract][Full Text] [Related]
9. Dissecting Immune Circuits by Linking CRISPR-Pooled Screens with Single-Cell RNA-Seq.
Jaitin DA; Weiner A; Yofe I; Lara-Astiaso D; Keren-Shaul H; David E; Salame TM; Tanay A; van Oudenaarden A; Amit I
Cell; 2016 Dec; 167(7):1883-1896.e15. PubMed ID: 27984734
[TBL] [Abstract][Full Text] [Related]
10. Next-generation forward genetic screens: uniting high-throughput perturbations with single-cell analysis.
Morris JA; Sun JS; Sanjana NE
Trends Genet; 2024 Feb; 40(2):118-133. PubMed ID: 37989654
[TBL] [Abstract][Full Text] [Related]
11. Model-based understanding of single-cell CRISPR screening.
Duan B; Zhou C; Zhu C; Yu Y; Li G; Zhang S; Zhang C; Ye X; Ma H; Qu S; Zhang Z; Wang P; Sun S; Liu Q
Nat Commun; 2019 May; 10(1):2233. PubMed ID: 31110232
[TBL] [Abstract][Full Text] [Related]
12. Computational Analysis Concerning the Impact of DNA Accessibility on CRISPR-Cas9 Cleavage Efficiency.
Chung CH; Allen AG; Sullivan NT; Atkins A; Nonnemacher MR; Wigdahl B; Dampier W
Mol Ther; 2020 Jan; 28(1):19-28. PubMed ID: 31672284
[TBL] [Abstract][Full Text] [Related]
13. Evaluating Capture Sequence Performance for Single-Cell CRISPR Activation Experiments.
Choo XY; Lim YM; Katwadi K; Yap L; Tryggvason K; Sun AX; Li S; Handoko L; Ouyang JF; Rackham OJL
ACS Synth Biol; 2021 Mar; 10(3):640-645. PubMed ID: 33625849
[TBL] [Abstract][Full Text] [Related]
14. A Genome-wide Framework for Mapping Gene Regulation via Cellular Genetic Screens.
Gasperini M; Hill AJ; McFaline-Figueroa JL; Martin B; Kim S; Zhang MD; Jackson D; Leith A; Schreiber J; Noble WS; Trapnell C; Ahituv N; Shendure J
Cell; 2019 Jan; 176(1-2):377-390.e19. PubMed ID: 30612741
[TBL] [Abstract][Full Text] [Related]
15. Experimental and Computational Approaches for Single-Cell Enhancer Perturbation Assay.
Xie S; Hon GC
Methods Mol Biol; 2019; 1935():203-221. PubMed ID: 30758829
[TBL] [Abstract][Full Text] [Related]
16. Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells.
Mimitou EP; Cheng A; Montalbano A; Hao S; Stoeckius M; Legut M; Roush T; Herrera A; Papalexi E; Ouyang Z; Satija R; Sanjana NE; Koralov SB; Smibert P
Nat Methods; 2019 May; 16(5):409-412. PubMed ID: 31011186
[TBL] [Abstract][Full Text] [Related]
17. Robust differential expression testing for single-cell CRISPR screens at low multiplicity of infection.
Barry T; Mason K; Roeder K; Katsevich E
Genome Biol; 2024 May; 25(1):124. PubMed ID: 38760839
[TBL] [Abstract][Full Text] [Related]
18. SCEPTRE improves calibration and sensitivity in single-cell CRISPR screen analysis.
Barry T; Wang X; Morris JA; Roeder K; Katsevich E
Genome Biol; 2021 Dec; 22(1):344. PubMed ID: 34930414
[TBL] [Abstract][Full Text] [Related]
19. Pooled Knockin Targeting for Genome Engineering of Cellular Immunotherapies.
Roth TL; Li PJ; Blaeschke F; Nies JF; Apathy R; Mowery C; Yu R; Nguyen MLT; Lee Y; Truong A; Hiatt J; Wu D; Nguyen DN; Goodman D; Bluestone JA; Ye CJ; Roybal K; Shifrut E; Marson A
Cell; 2020 Apr; 181(3):728-744.e21. PubMed ID: 32302591
[TBL] [Abstract][Full Text] [Related]
20. Minimized combinatorial CRISPR screens identify genetic interactions in autophagy.
Diehl V; Wegner M; Grumati P; Husnjak K; Schaubeck S; Gubas A; Shah VJ; Polat IH; Langschied F; Prieto-Garcia C; Müller K; Kalousi A; Ebersberger I; Brandts CH; Dikic I; Kaulich M
Nucleic Acids Res; 2021 Jun; 49(10):5684-5704. PubMed ID: 33956155
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
