155 related articles for article (PubMed ID: 32495495)
21. Metagenomes Binning Using Proximity-Ligation Data.
Marbouty M; Koszul R
Methods Mol Biol; 2022; 2301():163-181. PubMed ID: 34415535
[TBL] [Abstract][Full Text] [Related]
22. 500 metagenome-assembled microbial genomes from 30 subtropical estuaries in South China.
Zhou L; Huang S; Gong J; Xu P; Huang X
Sci Data; 2022 Jun; 9(1):310. PubMed ID: 35710651
[TBL] [Abstract][Full Text] [Related]
23. Evaluating metagenomics tools for genome binning with real metagenomic datasets and CAMI datasets.
Yue Y; Huang H; Qi Z; Dou HM; Liu XY; Han TF; Chen Y; Song XJ; Zhang YH; Tu J
BMC Bioinformatics; 2020 Jul; 21(1):334. PubMed ID: 32723290
[TBL] [Abstract][Full Text] [Related]
24. Constructing metagenome-assembled genomes for almost all components in a real bacterial consortium for binning benchmarking.
Wu Z; Wang Y; Zeng J; Zhou Y
BMC Genomics; 2022 Nov; 23(1):746. PubMed ID: 36352370
[TBL] [Abstract][Full Text] [Related]
25. Microbial communities of the Laurentian Great Lakes reflect connectivity and local biogeochemistry.
Paver SF; Newton RJ; Coleman ML
Environ Microbiol; 2020 Jan; 22(1):433-446. PubMed ID: 31736217
[TBL] [Abstract][Full Text] [Related]
26. Candidatus Anthektikosiphon siderophilum OHK22, a New Member of the Chloroflexi Family Herpetosiphonaceae from Oku-okuhachikurou Onsen.
Ward LM; Fischer WW; McGlynn SE
Microbes Environ; 2020; 35(3):. PubMed ID: 32727976
[TBL] [Abstract][Full Text] [Related]
27. Filling the Gaps in the Cyanobacterial Tree of Life-Metagenome Analysis of
Marter P; Huang S; Brinkmann H; Pradella S; Jarek M; Rohde M; Bunk B; Petersen J
Genes (Basel); 2021 Mar; 12(3):. PubMed ID: 33803228
[TBL] [Abstract][Full Text] [Related]
28. Binning unassembled short reads based on k-mer abundance covariance using sparse coding.
Kyrgyzov O; Prost V; Gazut S; Farcy B; Brüls T
Gigascience; 2020 Apr; 9(4):. PubMed ID: 32219339
[TBL] [Abstract][Full Text] [Related]
29. HiCBin: binning metagenomic contigs and recovering metagenome-assembled genomes using Hi-C contact maps.
Du Y; Sun F
Genome Biol; 2022 Feb; 23(1):63. PubMed ID: 35227283
[TBL] [Abstract][Full Text] [Related]
30. 'Candidatus Viridilinea mediisalina', a novel phototrophic Chloroflexi bacterium from a Siberian soda lake.
Gaisin VA; Burganskaya EI; Grouzdev DS; Ashikhmin AA; Kostrikina NA; Bryantseva IA; Koziaeva VV; Gorlenko VM
FEMS Microbiol Lett; 2019 Mar; 366(5):. PubMed ID: 30801645
[TBL] [Abstract][Full Text] [Related]
31. MinION sequencing from sea ice cryoconites leads to de novo genome reconstruction from metagenomes.
Maggiori C; Raymond-Bouchard I; Brennan L; Touchette D; Whyte L
Sci Rep; 2021 Oct; 11(1):21041. PubMed ID: 34702846
[TBL] [Abstract][Full Text] [Related]
32. MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm.
Wu YW; Tang YH; Tringe SG; Simmons BA; Singer SW
Microbiome; 2014; 2():26. PubMed ID: 25136443
[TBL] [Abstract][Full Text] [Related]
33. Complex History of Aerobic Respiration and Phototrophy in the Chloroflexota Class Anaerolineae Revealed by High-Quality Draft Genome of Ca. Roseilinea mizusawaensis AA3_104.
Ward LM; Li-Hau F; Kakegawa T; McGlynn SE
Microbes Environ; 2021; 36(3):. PubMed ID: 34470945
[TBL] [Abstract][Full Text] [Related]
34. Taxonomic and functional insights into rock varnish microbiome using shotgun metagenomics.
Esposito A; Borruso L; Rattray JE; Brusetti L; Ahmed E
FEMS Microbiol Ecol; 2019 Dec; 95(12):. PubMed ID: 31730200
[TBL] [Abstract][Full Text] [Related]
35. Ecological and genomic features of two widespread freshwater picocyanobacteria.
Cabello-Yeves PJ; Picazo A; Camacho A; Callieri C; Rosselli R; Roda-Garcia JJ; Coutinho FH; Rodriguez-Valera F
Environ Microbiol; 2018 Oct; 20(10):3757-3771. PubMed ID: 30117250
[TBL] [Abstract][Full Text] [Related]
36. Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life.
Parks DH; Rinke C; Chuvochina M; Chaumeil PA; Woodcroft BJ; Evans PN; Hugenholtz P; Tyson GW
Nat Microbiol; 2017 Nov; 2(11):1533-1542. PubMed ID: 28894102
[TBL] [Abstract][Full Text] [Related]
37. Temperature and Nutrient Levels Correspond with Lineage-Specific Microdiversification in the Ubiquitous and Abundant Freshwater Genus
Props R; Denef VJ
Appl Environ Microbiol; 2020 May; 86(10):. PubMed ID: 32169939
[TBL] [Abstract][Full Text] [Related]
38. Optimizing and evaluating the reconstruction of Metagenome-assembled microbial genomes.
Papudeshi B; Haggerty JM; Doane M; Morris MM; Walsh K; Beattie DT; Pande D; Zaeri P; Silva GGZ; Thompson F; Edwards RA; Dinsdale EA
BMC Genomics; 2017 Nov; 18(1):915. PubMed ID: 29183281
[TBL] [Abstract][Full Text] [Related]
39. Theoretical and Simulation-Based Investigation of the Relationship between Sequencing Effort, Microbial Community Richness, and Diversity in Binning Metagenome-Assembled Genomes.
Royalty TM; Steen AD
mSystems; 2019 Sep; 4(5):. PubMed ID: 31530648
[TBL] [Abstract][Full Text] [Related]
40. Physiological and evolutionary potential of microorganisms from the Canterbury Basin subseafloor, a metagenomic approach.
Gaboyer F; Burgaud G; Alain K
FEMS Microbiol Ecol; 2015 May; 91(5):. PubMed ID: 25873465
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]