These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

143 related articles for article (PubMed ID: 32504001)

  • 1. Combining proteogenomics and metaproteomics for deep taxonomic and functional characterization of microbiomes from a non-sequenced host.
    Gouveia D; Pible O; Culotta K; Jouffret V; Geffard O; Chaumot A; Degli-Esposti D; Armengaud J
    NPJ Biofilms Microbiomes; 2020 Jun; 6(1):23. PubMed ID: 32504001
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Proteogenomics-Guided Evaluation of RNA-Seq Assembly and Protein Database Construction for Emergent Model Organisms.
    Cogne Y; Gouveia D; Chaumot A; Degli-Esposti D; Geffard O; Pible O; Almunia C; Armengaud J
    Proteomics; 2020 May; 20(10):e1900261. PubMed ID: 32249536
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Assessing the relevance of a multiplexed methodology for proteomic biomarker measurement in the invertebrate species Gammarus fossarum: A physiological and ecotoxicological study.
    Gouveia D; Chaumot A; Charnot A; Queau H; Armengaud J; Almunia C; Salvador A; Geffard O
    Aquat Toxicol; 2017 Sep; 190():199-209. PubMed ID: 28750222
    [TBL] [Abstract][Full Text] [Related]  

  • 4. De novo transcriptomes of 14 gammarid individuals for proteogenomic analysis of seven taxonomic groups.
    Cogne Y; Degli-Esposti D; Pible O; Gouveia D; François A; Bouchez O; Eché C; Ford A; Geffard O; Armengaud J; Chaumot A; Almunia C
    Sci Data; 2019 Sep; 6(1):184. PubMed ID: 31562330
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Metaproteomic and Metabolomic Approaches for Characterizing the Gut Microbiome.
    Peters DL; Wang W; Zhang X; Ning Z; Mayne J; Figeys D
    Proteomics; 2019 Aug; 19(16):e1800363. PubMed ID: 31321880
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Metaproteomics characterizes human gut microbiome function in colorectal cancer.
    Long S; Yang Y; Shen C; Wang Y; Deng A; Qin Q; Qiao L
    NPJ Biofilms Microbiomes; 2020 Mar; 6(1):14. PubMed ID: 32210237
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Deep Metaproteomics Approach for the Study of Human Microbiomes.
    Zhang X; Chen W; Ning Z; Mayne J; Mack D; Stintzi A; Tian R; Figeys D
    Anal Chem; 2017 Sep; 89(17):9407-9415. PubMed ID: 28749657
    [TBL] [Abstract][Full Text] [Related]  

  • 8. An integrated workflow for enhanced taxonomic and functional coverage of the mouse fecal metaproteome.
    Nalpas N; Hoyles L; Anselm V; Ganief T; Martinez-Gili L; Grau C; Droste-Borel I; Davidovic L; Altafaj X; Dumas ME; Macek B
    Gut Microbes; 2021; 13(1):1994836. PubMed ID: 34763597
    [TBL] [Abstract][Full Text] [Related]  

  • 9. High-throughput proteome dynamics for discovery of key proteins in sentinel species: Unsuspected vitellogenins diversity in the crustacean Gammarus fossarum.
    Trapp J; Armengaud J; Gaillard JC; Pible O; Chaumot A; Geffard O
    J Proteomics; 2016 Sep; 146():207-14. PubMed ID: 27404005
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Proteogenomic insights into the core-proteome of female reproductive tissues from crustacean amphipods.
    Trapp J; Almunia C; Gaillard JC; Pible O; Chaumot A; Geffard O; Armengaud J
    J Proteomics; 2016 Mar; 135():51-61. PubMed ID: 26170043
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Discovery of novel community-relevant small proteins in a simplified human intestinal microbiome.
    Petruschke H; Schori C; Canzler S; Riesbeck S; Poehlein A; Daniel R; Frei D; Segessemann T; Zimmerman J; Marinos G; Kaleta C; Jehmlich N; Ahrens CH; von Bergen M
    Microbiome; 2021 Feb; 9(1):55. PubMed ID: 33622394
    [TBL] [Abstract][Full Text] [Related]  

  • 12. MetaPro-IQ: a universal metaproteomic approach to studying human and mouse gut microbiota.
    Zhang X; Ning Z; Mayne J; Moore JI; Li J; Butcher J; Deeke SA; Chen R; Chiang CK; Wen M; Mack D; Stintzi A; Figeys D
    Microbiome; 2016 Jun; 4(1):31. PubMed ID: 27343061
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Co-expression network analysis identifies novel molecular pathways associated with cadmium and pyriproxyfen testicular toxicity in Gammarus fossarum.
    Koenig N; Almunia C; Bonnal-Conduzorgues A; Armengaud J; Chaumot A; Geffard O; Esposti DD
    Aquat Toxicol; 2021 Jun; 235():105816. PubMed ID: 33838495
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Data-independent acquisition boosts quantitative metaproteomics for deep characterization of gut microbiota.
    Zhao J; Yang Y; Xu H; Zheng J; Shen C; Chen T; Wang T; Wang B; Yi J; Zhao D; Wu E; Qin Q; Xia L; Qiao L
    NPJ Biofilms Microbiomes; 2023 Jan; 9(1):4. PubMed ID: 36693863
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Proteogenomic reconstruction of organ-specific metabolic networks in an environmental sentinel species, the amphipod Gammarus fossarum.
    Koenig N; Baa-Puyoulet P; Lafont A; Lorenzo-Colina I; Navratil V; Leprêtre M; Sugier K; Delorme N; Garnero L; Queau H; Gaillard JC; Kielbasa M; Ayciriex S; Calevro F; Chaumot A; Charles H; Armengaud J; Geffard O; Degli Esposti D
    Comp Biochem Physiol Part D Genomics Proteomics; 2024 Dec; 52():101323. PubMed ID: 39276751
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Proteogenomics: Recycling Public Data to Improve Genome Annotations.
    McAfee A; Foster LJ
    Methods Enzymol; 2017; 585():217-243. PubMed ID: 28109431
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Estimating relative biomasses of organisms in microbiota using "phylopeptidomics".
    Pible O; Allain F; Jouffret V; Culotta K; Miotello G; Armengaud J
    Microbiome; 2020 Mar; 8(1):30. PubMed ID: 32143687
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Proteogenomics: From next-generation sequencing (NGS) and mass spectrometry-based proteomics to precision medicine.
    Ang MY; Low TY; Lee PY; Wan Mohamad Nazarie WF; Guryev V; Jamal R
    Clin Chim Acta; 2019 Nov; 498():38-46. PubMed ID: 31421119
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Metaproteomics Analysis of Host-Microbiota Interfaces.
    van der Post S; Arike L
    Methods Mol Biol; 2021; 2259():167-179. PubMed ID: 33687714
    [TBL] [Abstract][Full Text] [Related]  

  • 20. High-multiplexed monitoring of protein biomarkers in the sentinel Gammarus fossarum by targeted scout-MRM assay, a new vision for ecotoxicoproteomics.
    Faugere J; Gouveia D; Ayciriex S; Chaumot A; Almunia C; François A; Armengaud J; Lemoine J; Geffard O; Degli-Esposti D; Salvador A
    J Proteomics; 2020 Aug; 226():103901. PubMed ID: 32668291
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.