292 related articles for article (PubMed ID: 32518417)
1. CTCF-mediated genome organization and leukemogenesis.
Qiu Y; Huang S
Leukemia; 2020 Sep; 34(9):2295-2304. PubMed ID: 32518417
[TBL] [Abstract][Full Text] [Related]
2. HOTTIP-dependent R-loop formation regulates CTCF boundary activity and TAD integrity in leukemia.
Luo H; Zhu G; Eshelman MA; Fung TK; Lai Q; Wang F; Zeisig BB; Lesperance J; Ma X; Chen S; Cesari N; Cogle C; Chen B; Xu B; Yang FC; So CWE; Qiu Y; Xu M; Huang S
Mol Cell; 2022 Feb; 82(4):833-851.e11. PubMed ID: 35180428
[TBL] [Abstract][Full Text] [Related]
3. Alteration of CTCF-associated chromatin neighborhood inhibits TAL1-driven oncogenic transcription program and leukemogenesis.
Li Y; Liao Z; Luo H; Benyoucef A; Kang Y; Lai Q; Dovat S; Miller B; Chepelev I; Li Y; Zhao K; Brand M; Huang S
Nucleic Acids Res; 2020 Apr; 48(6):3119-3133. PubMed ID: 32086528
[TBL] [Abstract][Full Text] [Related]
4. A tour of 3D genome with a focus on CTCF.
Wang DC; Wang W; Zhang L; Wang X
Semin Cell Dev Biol; 2019 Jun; 90():4-11. PubMed ID: 30031214
[TBL] [Abstract][Full Text] [Related]
5. Boundary Associated Long Noncoding RNA Mediates Long-Range Chromosomal Interactions.
Nwigwe IJ; Kim YJ; Wacker DA; Kim TH
PLoS One; 2015; 10(8):e0136104. PubMed ID: 26302455
[TBL] [Abstract][Full Text] [Related]
6. Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins.
Wutz G; Várnai C; Nagasaka K; Cisneros DA; Stocsits RR; Tang W; Schoenfelder S; Jessberger G; Muhar M; Hossain MJ; Walther N; Koch B; Kueblbeck M; Ellenberg J; Zuber J; Fraser P; Peters JM
EMBO J; 2017 Dec; 36(24):3573-3599. PubMed ID: 29217591
[TBL] [Abstract][Full Text] [Related]
7. Active enhancers strengthen insulation by RNA-mediated CTCF binding at chromatin domain boundaries.
Islam Z; Saravanan B; Walavalkar K; Farooq U; Singh AK; Radhakrishnan S; Thakur J; Pandit A; Henikoff S; Notani D
Genome Res; 2023 Jan; 33(1):1-17. PubMed ID: 36650052
[TBL] [Abstract][Full Text] [Related]
8. HOX Loci Focused CRISPR/sgRNA Library Screening Identifying Critical CTCF Boundaries.
Luo H; Sobh A; Vulpe CD; Brewer E; Dovat S; Qiu Y; Huang S
J Vis Exp; 2019 Mar; (145):. PubMed ID: 30985763
[TBL] [Abstract][Full Text] [Related]
9. 5C analysis of the Epidermal Differentiation Complex locus reveals distinct chromatin interaction networks between gene-rich and gene-poor TADs in skin epithelial cells.
Poterlowicz K; Yarker JL; Malashchuk I; Lajoie BR; Mardaryev AN; Gdula MR; Sharov AA; Kohwi-Shigematsu T; Botchkarev VA; Fessing MY
PLoS Genet; 2017 Sep; 13(9):e1006966. PubMed ID: 28863138
[TBL] [Abstract][Full Text] [Related]
10. CTCF: a Swiss-army knife for genome organization and transcription regulation.
Braccioli L; de Wit E
Essays Biochem; 2019 Apr; 63(1):157-165. PubMed ID: 30940740
[TBL] [Abstract][Full Text] [Related]
11. Chromatin Architecture in the Fly: Living without CTCF/Cohesin Loop Extrusion?: Alternating Chromatin States Provide a Basis for Domain Architecture in Drosophila.
Matthews NE; White R
Bioessays; 2019 Sep; 41(9):e1900048. PubMed ID: 31264253
[TBL] [Abstract][Full Text] [Related]
12. CTCF is dispensable for immune cell transdifferentiation but facilitates an acute inflammatory response.
Stik G; Vidal E; Barrero M; Cuartero S; Vila-Casadesús M; Mendieta-Esteban J; Tian TV; Choi J; Berenguer C; Abad A; Borsari B; le Dily F; Cramer P; Marti-Renom MA; Stadhouders R; Graf T
Nat Genet; 2020 Jul; 52(7):655-661. PubMed ID: 32514124
[TBL] [Abstract][Full Text] [Related]
13. A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus.
Barutcu AR; Maass PG; Lewandowski JP; Weiner CL; Rinn JL
Nat Commun; 2018 Apr; 9(1):1444. PubMed ID: 29654311
[TBL] [Abstract][Full Text] [Related]
14. An alternative CTCF isoform antagonizes canonical CTCF occupancy and changes chromatin architecture to promote apoptosis.
Li J; Huang K; Hu G; Babarinde IA; Li Y; Dong X; Chen YS; Shang L; Guo W; Wang J; Chen Z; Hutchins AP; Yang YG; Yao H
Nat Commun; 2019 Apr; 10(1):1535. PubMed ID: 30948729
[TBL] [Abstract][Full Text] [Related]
15. CTCF as a boundary factor for cohesin-mediated loop extrusion: evidence for a multi-step mechanism.
Hansen AS
Nucleus; 2020 Dec; 11(1):132-148. PubMed ID: 32631111
[TBL] [Abstract][Full Text] [Related]
16. Differential 3D chromatin organization and gene activity in genomic imprinting.
Noordermeer D; Feil R
Curr Opin Genet Dev; 2020 Apr; 61():17-24. PubMed ID: 32299027
[TBL] [Abstract][Full Text] [Related]
17. Three-dimensional genome organization in normal and malignant haematopoiesis.
Cuartero S; Merkenschlager M
Curr Opin Hematol; 2018 Jul; 25(4):323-328. PubMed ID: 29702522
[TBL] [Abstract][Full Text] [Related]
18. Absolute quantification of cohesin, CTCF and their regulators in human cells.
Holzmann J; Politi AZ; Nagasaka K; Hantsche-Grininger M; Walther N; Koch B; Fuchs J; Dürnberger G; Tang W; Ladurner R; Stocsits RR; Busslinger GA; Novák B; Mechtler K; Davidson IF; Ellenberg J; Peters JM
Elife; 2019 Jun; 8():. PubMed ID: 31204999
[TBL] [Abstract][Full Text] [Related]
19. Computational prediction of CTCF/cohesin-based intra-TAD loops that insulate chromatin contacts and gene expression in mouse liver.
Matthews BJ; Waxman DJ
Elife; 2018 May; 7():. PubMed ID: 29757144
[TBL] [Abstract][Full Text] [Related]
20. Acute depletion of CTCF directly affects MYC regulation through loss of enhancer-promoter looping.
Hyle J; Zhang Y; Wright S; Xu B; Shao Y; Easton J; Tian L; Feng R; Xu P; Li C
Nucleic Acids Res; 2019 Jul; 47(13):6699-6713. PubMed ID: 31127282
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
