177 related articles for article (PubMed ID: 32524530)
21. FA-nf: A Functional Annotation Pipeline for Proteins from Non-Model Organisms Implemented in Nextflow.
Vlasova A; Hermoso Pulido T; Camara F; Ponomarenko J; Guigó R
Genes (Basel); 2021 Oct; 12(10):. PubMed ID: 34681040
[TBL] [Abstract][Full Text] [Related]
22. Vcfanno: fast, flexible annotation of genetic variants.
Pedersen BS; Layer RM; Quinlan AR
Genome Biol; 2016 Jun; 17(1):118. PubMed ID: 27250555
[TBL] [Abstract][Full Text] [Related]
23. DivBrowse-interactive visualization and exploratory data analysis of variant call matrices.
König P; Beier S; Mascher M; Stein N; Lange M; Scholz U
Gigascience; 2022 Dec; 12():. PubMed ID: 37083938
[TBL] [Abstract][Full Text] [Related]
24. GFF-Ex: a genome feature extraction package.
Rastogi A; Gupta D
BMC Res Notes; 2014 May; 7():315. PubMed ID: 24885931
[TBL] [Abstract][Full Text] [Related]
25. Pygenomics: manipulating genomic intervals and data files in Python.
Tamazian G; Cherkasov N; Kanapin A; Samsonova A
Bioinformatics; 2023 Jun; 39(6):. PubMed ID: 37228014
[TBL] [Abstract][Full Text] [Related]
26. A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studies.
Thakur S; Guttman DS
BMC Bioinformatics; 2016 Jun; 17(1):260. PubMed ID: 27363390
[TBL] [Abstract][Full Text] [Related]
27. SOBA: sequence ontology bioinformatics analysis.
Moore B; Fan G; Eilbeck K
Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W161-4. PubMed ID: 20494974
[TBL] [Abstract][Full Text] [Related]
28. Genome annotation techniques: new approaches and challenges.
Rust AG; Mongin E; Birney E
Drug Discov Today; 2002 Jun; 7(11):S70-6. PubMed ID: 12047883
[TBL] [Abstract][Full Text] [Related]
29. AnnotaPipeline: An integrated tool to annotate eukaryotic proteins using multi-omics data.
Maia GA; Filho VB; Kawagoe EK; Teixeira Soratto TA; Moreira RS; Grisard EC; Wagner G
Front Genet; 2022; 13():1020100. PubMed ID: 36482896
[TBL] [Abstract][Full Text] [Related]
30. ShAn: An easy-to-use tool for interactive and integrated variant annotation.
Rathinakannan VS; Schukov HP; Heron S; Schleutker J; Sipeky C
PLoS One; 2020; 15(7):e0235669. PubMed ID: 32634151
[TBL] [Abstract][Full Text] [Related]
31. RGAAT: A Reference-based Genome Assembly and Annotation Tool for New Genomes and Upgrade of Known Genomes.
Liu W; Wu S; Lin Q; Gao S; Ding F; Zhang X; Aljohi HA; Yu J; Hu S
Genomics Proteomics Bioinformatics; 2018 Oct; 16(5):373-381. PubMed ID: 30583062
[TBL] [Abstract][Full Text] [Related]
32. WImpiBLAST: web interface for mpiBLAST to help biologists perform large-scale annotation using high performance computing.
Sharma P; Mantri SS
PLoS One; 2014; 9(6):e101144. PubMed ID: 24979410
[TBL] [Abstract][Full Text] [Related]
33. Genome Annotation Generator: a simple tool for generating and correcting WGS annotation tables for NCBI submission.
Geib SM; Hall B; Derego T; Bremer FT; Cannoles K; Sim SB
Gigascience; 2018 Apr; 7(4):1-5. PubMed ID: 29635297
[TBL] [Abstract][Full Text] [Related]
34. Apollo: Democratizing genome annotation.
Dunn NA; Unni DR; Diesh C; Munoz-Torres M; Harris NL; Yao E; Rasche H; Holmes IH; Elsik CG; Lewis SE
PLoS Comput Biol; 2019 Feb; 15(2):e1006790. PubMed ID: 30726205
[TBL] [Abstract][Full Text] [Related]
35. Bakta: rapid and standardized annotation of bacterial genomes via alignment-free sequence identification.
Schwengers O; Jelonek L; Dieckmann MA; Beyvers S; Blom J; Goesmann A
Microb Genom; 2021 Nov; 7(11):. PubMed ID: 34739369
[TBL] [Abstract][Full Text] [Related]
36. bitacora: A comprehensive tool for the identification and annotation of gene families in genome assemblies.
Vizueta J; Sánchez-Gracia A; Rozas J
Mol Ecol Resour; 2020 Sep; 20(5):1445-1452. PubMed ID: 32492257
[TBL] [Abstract][Full Text] [Related]
37. htsint: a Python library for sequencing pipelines that combines data through gene set generation.
Richards AJ; Herrel A; Bonneaud C
BMC Bioinformatics; 2015 Sep; 16():307. PubMed ID: 26399714
[TBL] [Abstract][Full Text] [Related]
38. Structural and Functional Annotation of Eukaryotic Genomes with GenSAS.
Humann JL; Lee T; Ficklin S; Main D
Methods Mol Biol; 2019; 1962():29-51. PubMed ID: 31020553
[TBL] [Abstract][Full Text] [Related]
39. Genomic variant annotation and prioritization with ANNOVAR and wANNOVAR.
Yang H; Wang K
Nat Protoc; 2015 Oct; 10(10):1556-66. PubMed ID: 26379229
[TBL] [Abstract][Full Text] [Related]
40. Jannovar: a java library for exome annotation.
Jäger M; Wang K; Bauer S; Smedley D; Krawitz P; Robinson PN
Hum Mutat; 2014 May; 35(5):548-55. PubMed ID: 24677618
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]