322 related articles for article (PubMed ID: 32535960)
1. cnnAlpha: Protein disordered regions prediction by reduced amino acid alphabets and convolutional neural networks.
Oberti M; Vaisman II
Proteins; 2020 Nov; 88(11):1472-1481. PubMed ID: 32535960
[TBL] [Abstract][Full Text] [Related]
2. AUCpreD: proteome-level protein disorder prediction by AUC-maximized deep convolutional neural fields.
Wang S; Ma J; Xu J
Bioinformatics; 2016 Sep; 32(17):i672-i679. PubMed ID: 27587688
[TBL] [Abstract][Full Text] [Related]
3. MemDis: Predicting Disordered Regions in Transmembrane Proteins.
Dobson L; Tusnády GE
Int J Mol Sci; 2021 Nov; 22(22):. PubMed ID: 34830151
[TBL] [Abstract][Full Text] [Related]
4. MoRFPred_en: Sequence-based prediction of MoRFs using an ensemble learning strategy.
Fang C; Moriwaki Y; Li C; Shimizu K
J Bioinform Comput Biol; 2019 Dec; 17(6):1940015. PubMed ID: 32019410
[TBL] [Abstract][Full Text] [Related]
5. DeepCNF-D: Predicting Protein Order/Disorder Regions by Weighted Deep Convolutional Neural Fields.
Wang S; Weng S; Ma J; Tang Q
Int J Mol Sci; 2015 Jul; 16(8):17315-30. PubMed ID: 26230689
[TBL] [Abstract][Full Text] [Related]
6. Identifying short disorder-to-order binding regions in disordered proteins with a deep convolutional neural network method.
Fang C; Moriwaki Y; Tian A; Li C; Shimizu K
J Bioinform Comput Biol; 2019 Feb; 17(1):1950004. PubMed ID: 30866736
[TBL] [Abstract][Full Text] [Related]
7. Prediction of Disordered Regions in Proteins with Recurrent Neural Networks and Protein Dynamics.
Orlando G; Raimondi D; Codicè F; Tabaro F; Vranken W
J Mol Biol; 2022 Jun; 434(12):167579. PubMed ID: 35469832
[TBL] [Abstract][Full Text] [Related]
8. An Overview of Practical Applications of Protein Disorder Prediction and Drive for Faster, More Accurate Predictions.
Deng X; Gumm J; Karki S; Eickholt J; Cheng J
Int J Mol Sci; 2015 Jul; 16(7):15384-404. PubMed ID: 26198229
[TBL] [Abstract][Full Text] [Related]
9. A comprehensive review and comparison of existing computational methods for intrinsically disordered protein and region prediction.
Liu Y; Wang X; Liu B
Brief Bioinform; 2019 Jan; 20(1):330-346. PubMed ID: 30657889
[TBL] [Abstract][Full Text] [Related]
10. Automated alphabet reduction for protein datasets.
Bacardit J; Stout M; Hirst JD; Valencia A; Smith RE; Krasnogor N
BMC Bioinformatics; 2009 Jan; 10():6. PubMed ID: 19126227
[TBL] [Abstract][Full Text] [Related]
11. IDP⁻CRF: Intrinsically Disordered Protein/Region Identification Based on Conditional Random Fields.
Liu Y; Wang X; Liu B
Int J Mol Sci; 2018 Aug; 19(9):. PubMed ID: 30135358
[TBL] [Abstract][Full Text] [Related]
12. Accurate and Fast Prediction of Intrinsically Disordered Protein by Multiple Protein Language Models and Ensemble Learning.
Xu S; Onoda A
J Chem Inf Model; 2024 Apr; 64(7):2901-2911. PubMed ID: 37883249
[TBL] [Abstract][Full Text] [Related]
13. DisoMCS: Accurately Predicting Protein Intrinsically Disordered Regions Using a Multi-Class Conservative Score Approach.
Wang Z; Yang Q; Li T; Cong P
PLoS One; 2015; 10(6):e0128334. PubMed ID: 26090958
[TBL] [Abstract][Full Text] [Related]
14. DISOPRED3: precise disordered region predictions with annotated protein-binding activity.
Jones DT; Cozzetto D
Bioinformatics; 2015 Mar; 31(6):857-63. PubMed ID: 25391399
[TBL] [Abstract][Full Text] [Related]
15. Accurate Single-Sequence Prediction of Protein Intrinsic Disorder by an Ensemble of Deep Recurrent and Convolutional Architectures.
Hanson J; Paliwal K; Zhou Y
J Chem Inf Model; 2018 Nov; 58(11):2369-2376. PubMed ID: 30395465
[TBL] [Abstract][Full Text] [Related]
16. Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model.
Wang S; Sun S; Li Z; Zhang R; Xu J
PLoS Comput Biol; 2017 Jan; 13(1):e1005324. PubMed ID: 28056090
[TBL] [Abstract][Full Text] [Related]
17. TransDFL: Identification of Disordered Flexible Linkers in Proteins by Transfer Learning.
Pang Y; Liu B
Genomics Proteomics Bioinformatics; 2023 Apr; 21(2):359-369. PubMed ID: 36272675
[TBL] [Abstract][Full Text] [Related]
18. DeepDISOBind: accurate prediction of RNA-, DNA- and protein-binding intrinsically disordered residues with deep multi-task learning.
Zhang F; Zhao B; Shi W; Li M; Kurgan L
Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34905768
[TBL] [Abstract][Full Text] [Related]
19. Discovering MoRFs by trisecting intrinsically disordered protein sequence into terminals and middle regions.
Sharma R; Sharma A; Patil A; Tsunoda T
BMC Bioinformatics; 2019 Feb; 19(Suppl 13):378. PubMed ID: 30717652
[TBL] [Abstract][Full Text] [Related]
20. Predicting Protein-Protein Interfaces that Bind Intrinsically Disordered Protein Regions.
Wong ETC; Gsponer J
J Mol Biol; 2019 Aug; 431(17):3157-3178. PubMed ID: 31207240
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]