252 related articles for article (PubMed ID: 32555469)
1. Determination of RNA structural diversity and its role in HIV-1 RNA splicing.
Tomezsko PJ; Corbin VDA; Gupta P; Swaminathan H; Glasgow M; Persad S; Edwards MD; Mcintosh L; Papenfuss AT; Emery A; Swanstrom R; Zang T; Lan TCT; Bieniasz P; Kuritzkes DR; Tsibris A; Rouskin S
Nature; 2020 Jun; 582(7812):438-442. PubMed ID: 32555469
[TBL] [Abstract][Full Text] [Related]
2. Conserved stem-loop structures in the HIV-1 RNA region containing the A3 3' splice site and its cis-regulatory element: possible involvement in RNA splicing.
Jacquenet S; Ropers D; Bilodeau PS; Damier L; Mougin A; Stoltzfus CM; Branlant C
Nucleic Acids Res; 2001 Jan; 29(2):464-78. PubMed ID: 11139617
[TBL] [Abstract][Full Text] [Related]
3. Solution structure of the HIV-1 exon splicing silencer 3.
Levengood JD; Rollins C; Mishler CH; Johnson CA; Miner G; Rajan P; Znosko BM; Tolbert BS
J Mol Biol; 2012 Jan; 415(4):680-98. PubMed ID: 22154809
[TBL] [Abstract][Full Text] [Related]
4. Encoded Conformational Dynamics of the HIV Splice Site A3 Regulatory Locus: Implications for Differential Binding of hnRNP Splicing Auxiliary Factors.
Chiu LY; Emery A; Jain N; Sugarman A; Kendrick N; Luo L; Ford W; Swanstrom R; Tolbert BS
J Mol Biol; 2022 Sep; 434(18):167728. PubMed ID: 35870649
[TBL] [Abstract][Full Text] [Related]
5. Global synonymous mutagenesis identifies cis-acting RNA elements that regulate HIV-1 splicing and replication.
Takata MA; Soll SJ; Emery A; Blanco-Melo D; Swanstrom R; Bieniasz PD
PLoS Pathog; 2018 Jan; 14(1):e1006824. PubMed ID: 29377940
[TBL] [Abstract][Full Text] [Related]
6. Dynamic nanopore long-read sequencing analysis of HIV-1 splicing events during the early steps of infection.
Nguyen Quang N; Goudey S; Ségéral E; Mohammad A; Lemoine S; Blugeon C; Versapuech M; Paillart JC; Berlioz-Torrent C; Emiliani S; Gallois-Montbrun S
Retrovirology; 2020 Aug; 17(1):25. PubMed ID: 32807178
[TBL] [Abstract][Full Text] [Related]
7. Genome-Wide Analysis of Heterogeneous Nuclear Ribonucleoprotein (hnRNP) Binding to HIV-1 RNA Reveals a Key Role for hnRNP H1 in Alternative Viral mRNA Splicing.
Kutluay SB; Emery A; Penumutchu SR; Townsend D; Tenneti K; Madison MK; Stukenbroeker AM; Powell C; Jannain D; Tolbert BS; Swanstrom RI; Bieniasz PD
J Virol; 2019 Nov; 93(21):. PubMed ID: 31413137
[TBL] [Abstract][Full Text] [Related]
8. Natural Single-Nucleotide Variations in the HIV-1 Genomic SA1prox Region Can Alter Viral Replication Ability by Regulating Vif Expression Levels.
Nomaguchi M; Doi N; Sakai Y; Ode H; Iwatani Y; Ueno T; Matsumoto Y; Miyazaki Y; Masuda T; Adachi A
J Virol; 2016 May; 90(9):4563-4578. PubMed ID: 26912631
[TBL] [Abstract][Full Text] [Related]
9. Human immunodeficiency virus type 1 splicing at the major splice donor site is controlled by highly conserved RNA sequence and structural elements.
Mueller N; Klaver B; Berkhout B; Das AT
J Gen Virol; 2015 Nov; 96(11):3389-3395. PubMed ID: 26385834
[TBL] [Abstract][Full Text] [Related]
10. A Janus splicing regulatory element modulates HIV-1 tat and rev mRNA production by coordination of hnRNP A1 cooperative binding.
Marchand V; Méreau A; Jacquenet S; Thomas D; Mougin A; Gattoni R; Stévenin J; Branlant C
J Mol Biol; 2002 Nov; 323(4):629-52. PubMed ID: 12419255
[TBL] [Abstract][Full Text] [Related]
11. HIV-1 splicing at the major splice donor site is restricted by RNA structure.
Mueller N; van Bel N; Berkhout B; Das AT
Virology; 2014 Nov; 468-470():609-620. PubMed ID: 25305540
[TBL] [Abstract][Full Text] [Related]
12. HIV-1: To Splice or Not to Splice, That Is the Question.
Emery A; Swanstrom R
Viruses; 2021 Jan; 13(2):. PubMed ID: 33530363
[TBL] [Abstract][Full Text] [Related]
13. Overlapping cis sites used for splicing of HIV-1 env/nef and rev mRNAs.
Swanson AK; Stoltzfus CM
J Biol Chem; 1998 Dec; 273(51):34551-7. PubMed ID: 9852125
[TBL] [Abstract][Full Text] [Related]
14. In silico mutagenesis of RNA splicing in HIV-1.
Kim H; Yin J
Biotechnol Bioeng; 2005 Sep; 91(7):877-93. PubMed ID: 15937951
[TBL] [Abstract][Full Text] [Related]
15. Identification of new splice sites used for generation of rev transcripts in human immunodeficiency virus type 1 subtype C primary isolates.
Delgado E; Carrera C; Nebreda P; Fernández-García A; Pinilla M; García V; Pérez-Álvarez L; Thomson MM
PLoS One; 2012; 7(2):e30574. PubMed ID: 22363449
[TBL] [Abstract][Full Text] [Related]
16. Genome-scale deconvolution of RNA structure ensembles.
Morandi E; Manfredonia I; Simon LM; Anselmi F; van Hemert MJ; Oliviero S; Incarnato D
Nat Methods; 2021 Mar; 18(3):249-252. PubMed ID: 33619392
[TBL] [Abstract][Full Text] [Related]
17. Viral RNA structure analysis using DMS-MaPseq.
Tomezsko P; Swaminathan H; Rouskin S
Methods; 2020 Nov; 183():68-75. PubMed ID: 32251733
[TBL] [Abstract][Full Text] [Related]
18. A naturally arising mutation of a potential silencer of exon splicing in human immunodeficiency virus type 1 induces dominant aberrant splicing and arrests virus production.
Wentz MP; Moore BE; Cloyd MW; Berget SM; Donehower LA
J Virol; 1997 Nov; 71(11):8542-51. PubMed ID: 9343212
[TBL] [Abstract][Full Text] [Related]
19. The HIV-1 Tat Protein Enhances Splicing at the Major Splice Donor Site.
Mueller N; Pasternak AO; Klaver B; Cornelissen M; Berkhout B; Das AT
J Virol; 2018 Jul; 92(14):. PubMed ID: 29743356
[TBL] [Abstract][Full Text] [Related]
20. A suboptimal 5' splice site downstream of HIV-1 splice site A1 is required for unspliced viral mRNA accumulation and efficient virus replication.
Madsen JM; Stoltzfus CM
Retrovirology; 2006 Feb; 3():10. PubMed ID: 16457729
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
