BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

228 related articles for article (PubMed ID: 32578417)

  • 1. Effect of Molecular Crowding on the Stability of RNA G-Quadruplexes with Various Numbers of Quartets and Lengths of Loops.
    Matsumoto S; Tateishi-Karimata H; Takahashi S; Ohyama T; Sugimoto N
    Biochemistry; 2020 Jul; 59(28):2640-2649. PubMed ID: 32578417
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Volumetric contributions of loop regions of G-quadruplex DNA to the formation of the tertiary structure.
    Takahashi S; Sugimoto N
    Biophys Chem; 2017 Dec; 231():146-154. PubMed ID: 28188007
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Stability and structure of long intramolecular G-quadruplexes.
    Payet L; Huppert JL
    Biochemistry; 2012 Apr; 51(15):3154-61. PubMed ID: 22417391
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Thermodynamics-hydration relationships within loops that affect G-quadruplexes under molecular crowding conditions.
    Fujimoto T; Nakano S; Sugimoto N; Miyoshi D
    J Phys Chem B; 2013 Jan; 117(4):963-72. PubMed ID: 23153339
    [TBL] [Abstract][Full Text] [Related]  

  • 5. The folding of 5'-UTR human G-quadruplexes possessing a long central loop.
    Jodoin R; Bauer L; Garant JM; Mahdi Laaref A; Phaneuf F; Perreault JP
    RNA; 2014 Jul; 20(7):1129-41. PubMed ID: 24865610
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Unexpected Position-Dependent Effects of Ribose G-Quartets in G-Quadruplexes.
    Zhou J; Amrane S; Rosu F; Salgado GF; Bian Y; Tateishi-Karimata H; Largy E; Korkut DN; Bourdoncle A; Miyoshi D; Zhang J; Ju H; Wang W; Sugimoto N; Gabelica V; Mergny JL
    J Am Chem Soc; 2017 Jun; 139(23):7768-7779. PubMed ID: 28523907
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A sequence-independent analysis of the loop length dependence of intramolecular RNA G-quadruplex stability and topology.
    Zhang AY; Bugaut A; Balasubramanian S
    Biochemistry; 2011 Aug; 50(33):7251-8. PubMed ID: 21744844
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Monomorphic RNA G-quadruplex and polymorphic DNA G-quadruplex structures responding to cellular environmental factors.
    Zhang DH; Fujimoto T; Saxena S; Yu HQ; Miyoshi D; Sugimoto N
    Biochemistry; 2010 Jun; 49(21):4554-63. PubMed ID: 20420470
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Sole and stable RNA duplexes of G-rich sequences located in the 5'-untranslated region of protooncogenes.
    Saxena S; Miyoshi D; Sugimoto N
    Biochemistry; 2010 Aug; 49(33):7190-201. PubMed ID: 20672842
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Effect of loops and G-quartets on the stability of RNA G-quadruplexes.
    Pandey S; Agarwala P; Maiti S
    J Phys Chem B; 2013 Jun; 117(23):6896-905. PubMed ID: 23683360
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structural diversity and extreme stability of unimolecular Oxytricha nova telomeric G-quadruplex.
    Lee JY; Yoon J; Kihm HW; Kim DS
    Biochemistry; 2008 Mar; 47(11):3389-96. PubMed ID: 18298084
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Structure monomorphism of RNA G-quadruplex that is independent of surrounding condition.
    Zhang DH; Zhi GY
    J Biotechnol; 2010 Oct; 150(1):6-10. PubMed ID: 20670662
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Thermodynamic stability and folding kinetics of the major G-quadruplex and its loop isomers formed in the nuclease hypersensitive element in the human c-Myc promoter: effect of loops and flanking segments on the stability of parallel-stranded intramolecular G-quadruplexes.
    Hatzakis E; Okamoto K; Yang D
    Biochemistry; 2010 Nov; 49(43):9152-60. PubMed ID: 20849082
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Thermal stability and hydration state of DNA G-quadruplex regulated by loop regions.
    Fujimoto T; Miyoshi D; Tateishi-Karimata H; Sugimoto N
    Nucleic Acids Symp Ser (Oxf); 2009; (53):237-8. PubMed ID: 19749348
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Structural dynamics and cation interactions of DNA quadruplex molecules containing mixed guanine/cytosine quartets revealed by large-scale MD simulations.
    Spacková N; Berger I; Sponer J
    J Am Chem Soc; 2001 Apr; 123(14):3295-307. PubMed ID: 11457065
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Stability of Two-Quartet G-Quadruplexes and Their Dimers in Atomistic Simulations.
    Islam B; Stadlbauer P; Vorlíčková M; Mergny JL; Otyepka M; Šponer J
    J Chem Theory Comput; 2020 Jun; 16(6):3447-3463. PubMed ID: 32163706
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Guanines are a quartet's best friend: impact of base substitutions on the kinetics and stability of tetramolecular quadruplexes.
    Gros J; Rosu F; Amrane S; De Cian A; Gabelica V; Lacroix L; Mergny JL
    Nucleic Acids Res; 2007; 35(9):3064-75. PubMed ID: 17452368
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A comparison of DNA and RNA quadruplex structures and stabilities.
    Joachimi A; Benz A; Hartig JS
    Bioorg Med Chem; 2009 Oct; 17(19):6811-5. PubMed ID: 19736017
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Stability and structure of telomeric DNA sequences forming quadruplexes containing four G-tetrads with different topological arrangements.
    Petraccone L; Erra E; Esposito V; Randazzo A; Mayol L; Nasti L; Barone G; Giancola C
    Biochemistry; 2004 Apr; 43(16):4877-84. PubMed ID: 15096057
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Noncanonical structures and their thermodynamics of DNA and RNA under molecular crowding: beyond the Watson-Crick double helix.
    Sugimoto N
    Int Rev Cell Mol Biol; 2014; 307():205-73. PubMed ID: 24380597
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.