These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
215 related articles for article (PubMed ID: 32599506)
1. Computational structure modeling for diverse categories of macromolecular interactions. Aderinwale T; Christoffer CW; Sarkar D; Alnabati E; Kihara D Curr Opin Struct Biol; 2020 Oct; 64():1-8. PubMed ID: 32599506 [TBL] [Abstract][Full Text] [Related]
2. A Framework to Simplify Combined Sampling Strategies in Rosetta. Porter JR; Weitzner BD; Lange OF PLoS One; 2015; 10(9):e0138220. PubMed ID: 26381271 [TBL] [Abstract][Full Text] [Related]
3. Flexible docking of peptides to proteins using CABS-dock. Kurcinski M; Badaczewska-Dawid A; Kolinski M; Kolinski A; Kmiecik S Protein Sci; 2020 Jan; 29(1):211-222. PubMed ID: 31682301 [TBL] [Abstract][Full Text] [Related]
4. Docking proteins and peptides under evolutionary constraints in Critical Assessment of PRediction of Interactions rounds 38 to 45. Nadaradjane AA; Quignot C; Traoré S; Andreani J; Guerois R Proteins; 2020 Aug; 88(8):986-998. PubMed ID: 31746034 [TBL] [Abstract][Full Text] [Related]
6. GradDock: rapid simulation and tailored ranking functions for peptide-MHC Class I docking. Kyeong HH; Choi Y; Kim HS Bioinformatics; 2018 Feb; 34(3):469-476. PubMed ID: 28968726 [TBL] [Abstract][Full Text] [Related]
7. ATTRACT and PTools: open source programs for protein-protein docking. Schneider S; Saladin A; Fiorucci S; Prévost C; Zacharias M Methods Mol Biol; 2012; 819():221-32. PubMed ID: 22183540 [TBL] [Abstract][Full Text] [Related]
8. Computational modeling of protein-RNA complex structures. Tuszynska I; Matelska D; Magnus M; Chojnowski G; Kasprzak JM; Kozlowski LP; Dunin-Horkawicz S; Bujnicki JM Methods; 2014 Feb; 65(3):310-9. PubMed ID: 24083976 [TBL] [Abstract][Full Text] [Related]
9. Lessons from (co-)evolution in the docking of proteins and peptides for CAPRI Rounds 28-35. Yu J; Andreani J; Ochsenbein F; Guerois R Proteins; 2017 Mar; 85(3):378-390. PubMed ID: 27701780 [TBL] [Abstract][Full Text] [Related]
15. Efficient docking of peptides to proteins without prior knowledge of the binding site. Hetényi C; van der Spoel D Protein Sci; 2002 Jul; 11(7):1729-37. PubMed ID: 12070326 [TBL] [Abstract][Full Text] [Related]
17. Hierarchical Flexible Peptide Docking by Conformer Generation and Ensemble Docking of Peptides. Zhou P; Li B; Yan Y; Jin B; Wang L; Huang SY J Chem Inf Model; 2018 Jun; 58(6):1292-1302. PubMed ID: 29738247 [TBL] [Abstract][Full Text] [Related]
18. Extensive benchmark of rDock as a peptide-protein docking tool. Soler D; Westermaier Y; Soliva R J Comput Aided Mol Des; 2019 Jul; 33(7):613-626. PubMed ID: 31270654 [TBL] [Abstract][Full Text] [Related]
19. Information-driven modeling of protein-peptide complexes. Trellet M; Melquiond AS; Bonvin AM Methods Mol Biol; 2015; 1268():221-39. PubMed ID: 25555727 [TBL] [Abstract][Full Text] [Related]