These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

115 related articles for article (PubMed ID: 32621226)

  • 1. A Guide for Protein-Protein Docking Using SwarmDock.
    Moal IH; Chaleil RAG; Torchala M; Bates PA
    Methods Mol Biol; 2020; 2165():199-216. PubMed ID: 32621226
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Predicting the structure of protein-protein complexes using the SwarmDock Web Server.
    Torchala M; Bates PA
    Methods Mol Biol; 2014; 1137():181-97. PubMed ID: 24573482
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Flexible Protein-Protein Docking with SwarmDock.
    Moal IH; Chaleil RAG; Bates PA
    Methods Mol Biol; 2018; 1764():413-428. PubMed ID: 29605931
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SwarmDock: a server for flexible protein-protein docking.
    Torchala M; Moal IH; Chaleil RA; Fernandez-Recio J; Bates PA
    Bioinformatics; 2013 Mar; 29(6):807-9. PubMed ID: 23343604
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MDockPeP: A Web Server for Blind Prediction of Protein-Peptide Complex Structures.
    Xu X; Zou X
    Methods Mol Biol; 2020; 2165():259-272. PubMed ID: 32621230
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Modeling Protein-Protein or Protein-DNA/RNA Complexes Using the HDOCK Webserver.
    Yan Y; Huang SY
    Methods Mol Biol; 2020; 2165():217-229. PubMed ID: 32621227
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Dockground Tool for Development and Benchmarking of Protein Docking Procedures.
    Kundrotas PJ; Kotthoff I; Choi SW; Copeland MM; Vakser IA
    Methods Mol Biol; 2020; 2165():289-300. PubMed ID: 32621232
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Template-Based Modeling of Protein Complexes Using the PPI3D Web Server.
    Dapkūnas J; Venclovas Č
    Methods Mol Biol; 2020; 2165():139-155. PubMed ID: 32621223
    [TBL] [Abstract][Full Text] [Related]  

  • 9. HPEPDOCK: a web server for blind peptide-protein docking based on a hierarchical algorithm.
    Zhou P; Jin B; Li H; Huang SY
    Nucleic Acids Res; 2018 Jul; 46(W1):W443-W450. PubMed ID: 29746661
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Enhanced sampling of protein conformational states for dynamic cross-docking within the protein-protein docking server SwarmDock.
    Torchala M; Gerguri T; Chaleil RAG; Gordon P; Russell F; Keshani M; Bates PA
    Proteins; 2020 Aug; 88(8):962-972. PubMed ID: 31697436
    [TBL] [Abstract][Full Text] [Related]  

  • 11. GalaxyPepDock: a protein-peptide docking tool based on interaction similarity and energy optimization.
    Lee H; Heo L; Lee MS; Seok C
    Nucleic Acids Res; 2015 Jul; 43(W1):W431-5. PubMed ID: 25969449
    [TBL] [Abstract][Full Text] [Related]  

  • 12. CABS-dock web server for the flexible docking of peptides to proteins without prior knowledge of the binding site.
    Kurcinski M; Jamroz M; Blaszczyk M; Kolinski A; Kmiecik S
    Nucleic Acids Res; 2015 Jul; 43(W1):W419-24. PubMed ID: 25943545
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Protein-Protein and Protein-Peptide Docking with ClusPro Server.
    Alekseenko A; Ignatov M; Jones G; Sabitova M; Kozakov D
    Methods Mol Biol; 2020; 2165():157-174. PubMed ID: 32621224
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Fully Blind Docking at the Atomic Level for Protein-Peptide Complex Structure Prediction.
    Yan C; Xu X; Zou X
    Structure; 2016 Oct; 24(10):1842-1853. PubMed ID: 27642160
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Modeling of protein-peptide interactions using the CABS-dock web server for binding site search and flexible docking.
    Blaszczyk M; Kurcinski M; Kouza M; Wieteska L; Debinski A; Kolinski A; Kmiecik S
    Methods; 2016 Jan; 93():72-83. PubMed ID: 26165956
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Modeling of Protein Complexes and Molecular Assemblies with pyDock.
    Rosell M; Rodríguez-Lumbreras LA; Fernández-Recio J
    Methods Mol Biol; 2020; 2165():175-198. PubMed ID: 32621225
    [TBL] [Abstract][Full Text] [Related]  

  • 17. AnchorDock: Blind and Flexible Anchor-Driven Peptide Docking.
    Ben-Shimon A; Niv MY
    Structure; 2015 May; 23(5):929-940. PubMed ID: 25914054
    [TBL] [Abstract][Full Text] [Related]  

  • 18. InterEvDock2: an expanded server for protein docking using evolutionary and biological information from homology models and multimeric inputs.
    Quignot C; Rey J; Yu J; Tufféry P; Guerois R; Andreani J
    Nucleic Acids Res; 2018 Jul; 46(W1):W408-W416. PubMed ID: 29741647
    [TBL] [Abstract][Full Text] [Related]  

  • 19. HDOCK: a web server for protein-protein and protein-DNA/RNA docking based on a hybrid strategy.
    Yan Y; Zhang D; Zhou P; Li B; Huang SY
    Nucleic Acids Res; 2017 Jul; 45(W1):W365-W373. PubMed ID: 28521030
    [TBL] [Abstract][Full Text] [Related]  

  • 20. NPDock: a web server for protein-nucleic acid docking.
    Tuszynska I; Magnus M; Jonak K; Dawson W; Bujnicki JM
    Nucleic Acids Res; 2015 Jul; 43(W1):W425-30. PubMed ID: 25977296
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.