These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

286 related articles for article (PubMed ID: 32681512)

  • 1. Transcriptome-Wide Mapping of Protein-RNA Interactions.
    Bi X; Shen X
    Methods Mol Biol; 2020; 2161():161-173. PubMed ID: 32681512
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Transcriptome-Wide Profiling of Protein-RNA Interactions by Cross-Linking and Immunoprecipitation Mediated by FLAG-Biotin Tandem Purification.
    Bi X; Zhang X; Shen X
    J Vis Exp; 2020 May; (159):. PubMed ID: 32478734
    [TBL] [Abstract][Full Text] [Related]  

  • 3. PAR-CLIP and streamlined small RNA cDNA library preparation protocol for the identification of RNA binding protein target sites.
    Benhalevy D; McFarland HL; Sarshad AA; Hafner M
    Methods; 2017 Apr; 118-119():41-49. PubMed ID: 27871973
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Transcriptome-wide Identification of RNA-binding Protein Binding Sites Using Photoactivatable-Ribonucleoside-Enhanced Crosslinking Immunoprecipitation (PAR-CLIP).
    Maatz H; Kolinski M; Hubner N; Landthaler M
    Curr Protoc Mol Biol; 2017 Apr; 118():27.6.1-27.6.19. PubMed ID: 28369676
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SpyCLIP: an easy-to-use and high-throughput compatible CLIP platform for the characterization of protein-RNA interactions with high accuracy.
    Zhao Y; Zhang Y; Teng Y; Liu K; Liu Y; Li W; Wu L
    Nucleic Acids Res; 2019 Apr; 47(6):e33. PubMed ID: 30715466
    [TBL] [Abstract][Full Text] [Related]  

  • 6. PAR-CLIP for Discovering Target Sites of RNA-Binding Proteins.
    Garzia A; Morozov P; Sajek M; Meyer C; Tuschl T
    Methods Mol Biol; 2018; 1720():55-75. PubMed ID: 29236251
    [TBL] [Abstract][Full Text] [Related]  

  • 7. PAR-CliP--a method to identify transcriptome-wide the binding sites of RNA binding proteins.
    Hafner M; Landthaler M; Burger L; Khorshid M; Hausser J; Berninger P; Rothballer A; Ascano M; Jungkamp AC; Munschauer M; Ulrich A; Wardle GS; Dewell S; Zavolan M; Tuschl T
    J Vis Exp; 2010 Jul; (41):. PubMed ID: 20644507
    [TBL] [Abstract][Full Text] [Related]  

  • 8. iCLIP--transcriptome-wide mapping of protein-RNA interactions with individual nucleotide resolution.
    Konig J; Zarnack K; Rot G; Curk T; Kayikci M; Zupan B; Turner DJ; Luscombe NM; Ule J
    J Vis Exp; 2011 Apr; (50):. PubMed ID: 21559008
    [TBL] [Abstract][Full Text] [Related]  

  • 9. CLIP-seq to discover transcriptome-wide imprinting of RNA binding proteins in living cells.
    Saulière J; Le Hir H
    Methods Mol Biol; 2015; 1296():151-60. PubMed ID: 25791598
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Computational analysis of CLIP-seq data.
    Uhl M; Houwaart T; Corrado G; Wright PR; Backofen R
    Methods; 2017 Apr; 118-119():60-72. PubMed ID: 28254606
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Optimization of PAR-CLIP for transcriptome-wide identification of binding sites of RNA-binding proteins.
    Garzia A; Meyer C; Morozov P; Sajek M; Tuschl T
    Methods; 2017 Apr; 118-119():24-40. PubMed ID: 27765618
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Leveraging cross-link modification events in CLIP-seq for motif discovery.
    Bahrami-Samani E; Penalva LO; Smith AD; Uren PJ
    Nucleic Acids Res; 2015 Jan; 43(1):95-103. PubMed ID: 25505146
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Cross-linking and immunoprecipitation of nuclear RNA-binding proteins.
    Li Q; Uemura Y; Kawahara Y
    Methods Mol Biol; 2015; 1262():247-63. PubMed ID: 25555586
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A combined sequence and structure based method for discovering enriched motifs in RNA from in vivo binding data.
    Polishchuk M; Paz I; Kohen R; Mesika R; Yakhini Z; Mandel-Gutfreund Y
    Methods; 2017 Apr; 118-119():73-81. PubMed ID: 28274760
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Individual Nucleotide Resolution UV Cross-Linking and Immunoprecipitation (iCLIP) to Determine Protein-RNA Interactions.
    Sibley CR
    Methods Mol Biol; 2018; 1649():427-454. PubMed ID: 29130215
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP).
    Van Nostrand EL; Pratt GA; Shishkin AA; Gelboin-Burkhart C; Fang MY; Sundararaman B; Blue SM; Nguyen TB; Surka C; Elkins K; Stanton R; Rigo F; Guttman M; Yeo GW
    Nat Methods; 2016 Jun; 13(6):508-14. PubMed ID: 27018577
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Computational Analysis of RNA-Protein Interactions via Deep Sequencing.
    Li L; Förstner KU; Chao Y
    Methods Mol Biol; 2018; 1751():171-182. PubMed ID: 29508297
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Identification of high-confidence RNA regulatory elements by combinatorial classification of RNA-protein binding sites.
    Li YE; Xiao M; Shi B; Yang YT; Wang D; Wang F; Marcia M; Lu ZJ
    Genome Biol; 2017 Sep; 18(1):169. PubMed ID: 28886744
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Advances and challenges in the detection of transcriptome-wide protein-RNA interactions.
    Wheeler EC; Van Nostrand EL; Yeo GW
    Wiley Interdiscip Rev RNA; 2018 Jan; 9(1):. PubMed ID: 28853213
    [TBL] [Abstract][Full Text] [Related]  

  • 20. [Advances in technologies for large-scale enrichment and identification of ribonucleic acid-protein complexes].
    Fan Z; Qin W
    Se Pu; 2021 Feb; 39(2):105-111. PubMed ID: 34227341
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.