230 related articles for article (PubMed ID: 32750314)
1. XACT-Seq Comprehensively Defines the Promoter-Position and Promoter-Sequence Determinants for Initial-Transcription Pausing.
Winkelman JT; Pukhrambam C; Vvedenskaya IO; Zhang Y; Taylor DM; Shah P; Ebright RH; Nickels BE
Mol Cell; 2020 Sep; 79(5):797-811.e8. PubMed ID: 32750314
[TBL] [Abstract][Full Text] [Related]
2. Structural and mechanistic basis of σ-dependent transcriptional pausing.
Pukhrambam C; Molodtsov V; Kooshkbaghi M; Tareen A; Vu H; Skalenko KS; Su M; Yin Z; Winkelman JT; Kinney JB; Ebright RH; Nickels BE
Proc Natl Acad Sci U S A; 2022 Jun; 119(23):e2201301119. PubMed ID: 35653571
[TBL] [Abstract][Full Text] [Related]
3. Structural transitions in the transcription elongation complexes of bacterial RNA polymerase during σ-dependent pausing.
Zhilina E; Esyunina D; Brodolin K; Kulbachinskiy A
Nucleic Acids Res; 2012 Apr; 40(7):3078-91. PubMed ID: 22140106
[TBL] [Abstract][Full Text] [Related]
4. Interactions between RNA polymerase and the "core recognition element" counteract pausing.
Vvedenskaya IO; Vahedian-Movahed H; Bird JG; Knoblauch JG; Goldman SR; Zhang Y; Ebright RH; Nickels BE
Science; 2014 Jun; 344(6189):1285-9. PubMed ID: 24926020
[TBL] [Abstract][Full Text] [Related]
5. Visualizing translocation dynamics and nascent transcript errors in paused RNA polymerases in vivo.
Imashimizu M; Takahashi H; Oshima T; McIntosh C; Bubunenko M; Court DL; Kashlev M
Genome Biol; 2015 May; 16(1):98. PubMed ID: 25976475
[TBL] [Abstract][Full Text] [Related]
6. Transcriptome-Wide Effects of NusA on RNA Polymerase Pausing in Bacillus subtilis.
Jayasinghe OT; Mandell ZF; Yakhnin AV; Kashlev M; Babitzke P
J Bacteriol; 2022 May; 204(5):e0053421. PubMed ID: 35258320
[TBL] [Abstract][Full Text] [Related]
7. RNA Polymerase Pausing during Initial Transcription.
Duchi D; Bauer DL; Fernandez L; Evans G; Robb N; Hwang LC; Gryte K; Tomescu A; Zawadzki P; Morichaud Z; Brodolin K; Kapanidis AN
Mol Cell; 2016 Sep; 63(6):939-50. PubMed ID: 27618490
[TBL] [Abstract][Full Text] [Related]
8. XACT-seq: A photocrosslinking-based technique for detection of the RNA polymerase active-center position relative to DNA in
Pukhrambam C; Vvedenskaya IO; Nickels BE
STAR Protoc; 2021 Dec; 2(4):100858. PubMed ID: 34693360
[TBL] [Abstract][Full Text] [Related]
9. Interactions between RNA polymerase and the core recognition element are a determinant of transcription start site selection.
Vvedenskaya IO; Vahedian-Movahed H; Zhang Y; Taylor DM; Ebright RH; Nickels BE
Proc Natl Acad Sci U S A; 2016 May; 113(21):E2899-905. PubMed ID: 27162333
[TBL] [Abstract][Full Text] [Related]
10. Obligate movements of an active site-linked surface domain control RNA polymerase elongation and pausing via a Phe pocket anchor.
Bao Y; Landick R
Proc Natl Acad Sci U S A; 2021 Sep; 118(36):. PubMed ID: 34470825
[TBL] [Abstract][Full Text] [Related]
11. σ38-dependent promoter-proximal pausing by bacterial RNA polymerase.
Petushkov I; Esyunina D; Kulbachinskiy A
Nucleic Acids Res; 2017 Apr; 45(6):3006-3016. PubMed ID: 27928053
[TBL] [Abstract][Full Text] [Related]
12. Initial transcribed region sequences influence the composition and functional properties of the bacterial elongation complex.
Deighan P; Pukhrambam C; Nickels BE; Hochschild A
Genes Dev; 2011 Jan; 25(1):77-88. PubMed ID: 21205867
[TBL] [Abstract][Full Text] [Related]
13. Σ(70)-dependent transcription pausing in Escherichia coli.
Perdue SA; Roberts JW
J Mol Biol; 2011 Oct; 412(5):782-92. PubMed ID: 21316374
[TBL] [Abstract][Full Text] [Related]
14. Characteristics of σ-dependent pausing by RNA polymerases from Escherichia coli and Thermus aquaticus.
Zhilina EV; Miropolskaya NA; Bass IA; Brodolin KL; Kulbachinskiy AV
Biochemistry (Mosc); 2011 Oct; 76(10):1098-106. PubMed ID: 22098235
[TBL] [Abstract][Full Text] [Related]
15. Tethering sigma70 to RNA polymerase reveals high in vivo activity of sigma factors and sigma70-dependent pausing at promoter-distal locations.
Mooney RA; Landick R
Genes Dev; 2003 Nov; 17(22):2839-51. PubMed ID: 14630944
[TBL] [Abstract][Full Text] [Related]
16. NusG controls transcription pausing and RNA polymerase translocation throughout the
Yakhnin AV; FitzGerald PC; McIntosh C; Yakhnin H; Kireeva M; Turek-Herman J; Mandell ZF; Kashlev M; Babitzke P
Proc Natl Acad Sci U S A; 2020 Sep; 117(35):21628-21636. PubMed ID: 32817529
[TBL] [Abstract][Full Text] [Related]
17. The sigma 70 subunit of RNA polymerase induces lacUV5 promoter-proximal pausing of transcription.
Brodolin K; Zenkin N; Mustaev A; Mamaeva D; Heumann H
Nat Struct Mol Biol; 2004 Jun; 11(6):551-7. PubMed ID: 15122346
[TBL] [Abstract][Full Text] [Related]
18. Pausing controls branching between productive and non-productive pathways during initial transcription in bacteria.
Dulin D; Bauer DLV; Malinen AM; Bakermans JJW; Kaller M; Morichaud Z; Petushkov I; Depken M; Brodolin K; Kulbachinskiy A; Kapanidis AN
Nat Commun; 2018 Apr; 9(1):1478. PubMed ID: 29662062
[TBL] [Abstract][Full Text] [Related]
19. Early transcriptional arrest at Escherichia coli rplN and ompX promoters.
Stepanova E; Wang M; Severinov K; Borukhov S
J Biol Chem; 2009 Dec; 284(51):35702-13. PubMed ID: 19854830
[TBL] [Abstract][Full Text] [Related]
20. Control of transcriptional pausing by biased thermal fluctuations on repetitive genomic sequences.
Imashimizu M; Afek A; Takahashi H; Lubkowska L; Lukatsky DB
Proc Natl Acad Sci U S A; 2016 Nov; 113(47):E7409-E7417. PubMed ID: 27830653
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
