These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
153 related articles for article (PubMed ID: 32795948)
1. Protein energy landscape exploration with structure-based models. Neelamraju S; Wales DJ; Gosavi S Curr Opin Struct Biol; 2020 Oct; 64():145-151. PubMed ID: 32795948 [TBL] [Abstract][Full Text] [Related]
2. Insights from coarse-grained Gō models for protein folding and dynamics. Hills RD; Brooks CL Int J Mol Sci; 2009 Mar; 10(3):889-905. PubMed ID: 19399227 [TBL] [Abstract][Full Text] [Related]
3. Slow Folding of a Helical Protein: Large Barriers, Strong Internal Friction, or a Shallow, Bumpy Landscape? Subramanian S; Golla H; Divakar K; Kannan A; de Sancho D; Naganathan AN J Phys Chem B; 2020 Oct; 124(41):8973-8983. PubMed ID: 32955882 [TBL] [Abstract][Full Text] [Related]
4. Balancing energy and entropy: a minimalist model for the characterization of protein folding landscapes. Das P; Matysiak S; Clementi C Proc Natl Acad Sci U S A; 2005 Jul; 102(29):10141-6. PubMed ID: 16006532 [TBL] [Abstract][Full Text] [Related]
5. The role of high-dimensional diffusive search, stabilization, and frustration in protein folding. Rimratchada S; McLeish TC; Radford SE; Paci E Biophys J; 2014 Apr; 106(8):1729-40. PubMed ID: 24739172 [TBL] [Abstract][Full Text] [Related]
6. Go-Kit: A Tool To Enable Energy Landscape Exploration of Proteins. Neelamraju S; Wales DJ; Gosavi S J Chem Inf Model; 2019 May; 59(5):1703-1708. PubMed ID: 30977648 [TBL] [Abstract][Full Text] [Related]
7. Lessons about Protein Folding and Binding from Archetypal Folds. Campos LA; Sadqi M; Muñoz V Acc Chem Res; 2020 Oct; 53(10):2180-2188. PubMed ID: 32914959 [TBL] [Abstract][Full Text] [Related]
8. Quantifying the roughness on the free energy landscape: entropic bottlenecks and protein folding rates. Chavez LL; Onuchic JN; Clementi C J Am Chem Soc; 2004 Jul; 126(27):8426-32. PubMed ID: 15237999 [TBL] [Abstract][Full Text] [Related]
9. Topography of funneled landscapes determines the thermodynamics and kinetics of protein folding. Wang J; Oliveira RJ; Chu X; Whitford PC; Chahine J; Han W; Wang E; Onuchic JN; Leite VB Proc Natl Acad Sci U S A; 2012 Sep; 109(39):15763-8. PubMed ID: 23019359 [TBL] [Abstract][Full Text] [Related]
10. Asymmetric kinetics of protein structural changes. Marchal S; Font J; Ribó M; Vilanova M; Phillips RS; Lange R; Torrent J Acc Chem Res; 2009 Jun; 42(6):778-87. PubMed ID: 19378977 [TBL] [Abstract][Full Text] [Related]
11. Optimal combination of theory and experiment for the characterization of the protein folding landscape of S6: how far can a minimalist model go? Matysiak S; Clementi C J Mol Biol; 2004 Oct; 343(1):235-48. PubMed ID: 15381433 [TBL] [Abstract][Full Text] [Related]
12. From folding theories to folding proteins: a review and assessment of simulation studies of protein folding and unfolding. Shea JE; Brooks CL Annu Rev Phys Chem; 2001; 52():499-535. PubMed ID: 11326073 [TBL] [Abstract][Full Text] [Related]
13. Predicting and Simulating Mutational Effects on Protein Folding Kinetics. Naganathan AN Methods Mol Biol; 2022; 2376():373-386. PubMed ID: 34845621 [TBL] [Abstract][Full Text] [Related]
14. NMR Analysis of Protein Folding Interaction Networks. de Alba E Methods Mol Biol; 2022; 2376():173-185. PubMed ID: 34845610 [TBL] [Abstract][Full Text] [Related]
15. The energy landscape, folding pathways and the kinetics of a knotted protein. Prentiss MC; Wales DJ; Wolynes PG PLoS Comput Biol; 2010 Jul; 6(7):e1000835. PubMed ID: 20617197 [TBL] [Abstract][Full Text] [Related]
16. A knowledge-based move set for protein folding. Chen WW; Yang JS; Shakhnovich EI Proteins; 2007 Feb; 66(3):682-8. PubMed ID: 17143895 [TBL] [Abstract][Full Text] [Related]
17. Quantifying the topography of the intrinsic energy landscape of flexible biomolecular recognition. Chu X; Gan L; Wang E; Wang J Proc Natl Acad Sci U S A; 2013 Jun; 110(26):E2342-51. PubMed ID: 23754431 [TBL] [Abstract][Full Text] [Related]
18. Accurate Protein-Folding Transition-Path Statistics from a Simple Free-Energy Landscape. Jacobs WM; Shakhnovich EI J Phys Chem B; 2018 Dec; 122(49):11126-11136. PubMed ID: 30091592 [TBL] [Abstract][Full Text] [Related]
19. The nature of the free energy barriers to two-state folding. Akmal A; Muñoz V Proteins; 2004 Oct; 57(1):142-52. PubMed ID: 15326600 [TBL] [Abstract][Full Text] [Related]
20. Exploring the folding free energy landscape of a β-hairpin miniprotein, chignolin, using multiscale free energy landscape calculation method. Harada R; Kitao A J Phys Chem B; 2011 Jul; 115(27):8806-12. PubMed ID: 21648487 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]