188 related articles for article (PubMed ID: 32814062)
1. A Stochastic Model of Gene Expression with Polymerase Recruitment and Pause Release.
Cao Z; Filatova T; Oyarzún DA; Grima R
Biophys J; 2020 Sep; 119(5):1002-1014. PubMed ID: 32814062
[TBL] [Abstract][Full Text] [Related]
2. Analytical distributions for detailed models of stochastic gene expression in eukaryotic cells.
Cao Z; Grima R
Proc Natl Acad Sci U S A; 2020 Mar; 117(9):4682-4692. PubMed ID: 32071224
[TBL] [Abstract][Full Text] [Related]
3. Analysis of a detailed multi-stage model of stochastic gene expression using queueing theory and model reduction.
Ma M; Szavits-Nossan J; Singh A; Grima R
Math Biosci; 2024 Jul; 373():109204. PubMed ID: 38710441
[TBL] [Abstract][Full Text] [Related]
4. Coupling gene expression dynamics to cell size dynamics and cell cycle events: Exact and approximate solutions of the extended telegraph model.
Jia C; Grima R
iScience; 2023 Jan; 26(1):105746. PubMed ID: 36619980
[TBL] [Abstract][Full Text] [Related]
5. Applications of Little's Law to stochastic models of gene expression.
Elgart V; Jia T; Kulkarni RV
Phys Rev E Stat Nonlin Soft Matter Phys; 2010 Aug; 82(2 Pt 1):021901. PubMed ID: 20866831
[TBL] [Abstract][Full Text] [Related]
6. Uncovering the effect of RNA polymerase steric interactions on gene expression noise: Analytical distributions of nascent and mature RNA numbers.
Szavits-Nossan J; Grima R
Phys Rev E; 2023 Sep; 108(3-1):034405. PubMed ID: 37849194
[TBL] [Abstract][Full Text] [Related]
7. Quantifying how post-transcriptional noise and gene copy number variation bias transcriptional parameter inference from mRNA distributions.
Fu X; Patel HP; Coppola S; Xu L; Cao Z; Lenstra TL; Grima R
Elife; 2022 Oct; 11():. PubMed ID: 36250630
[TBL] [Abstract][Full Text] [Related]
8. Effects of DNA replication on mRNA noise.
Peterson JR; Cole JA; Fei J; Ha T; Luthey-Schulten ZA
Proc Natl Acad Sci U S A; 2015 Dec; 112(52):15886-91. PubMed ID: 26669443
[TBL] [Abstract][Full Text] [Related]
9. Distinguishing between models of mammalian gene expression: telegraph-like models versus mechanistic models.
Braichenko S; Holehouse J; Grima R
J R Soc Interface; 2021 Oct; 18(183):20210510. PubMed ID: 34610262
[TBL] [Abstract][Full Text] [Related]
10. Connecting protein and mRNA burst distributions for stochastic models of gene expression.
Elgart V; Jia T; Fenley AT; Kulkarni R
Phys Biol; 2011 Aug; 8(4):046001. PubMed ID: 21490380
[TBL] [Abstract][Full Text] [Related]
11. Transcription stochasticity of complex gene regulation models.
Schwabe A; Rybakova KN; Bruggeman FJ
Biophys J; 2012 Sep; 103(6):1152-61. PubMed ID: 22995487
[TBL] [Abstract][Full Text] [Related]
12. Post-transcriptional regulation tends to attenuate the mRNA noise and to increase the mRNA gain.
Shi C; Wang S; Zhou T; Jiang Y
Phys Biol; 2015 Aug; 12(5):056002. PubMed ID: 26266661
[TBL] [Abstract][Full Text] [Related]
13. What can we learn when fitting a simple telegraph model to a complex gene expression model?
Jiao F; Li J; Liu T; Zhu Y; Che W; Bleris L; Jia C
PLoS Comput Biol; 2024 May; 20(5):e1012118. PubMed ID: 38743803
[TBL] [Abstract][Full Text] [Related]
14. Exact solution of a three-stage model of stochastic gene expression including cell-cycle dynamics.
Wang Y; Yu Z; Grima R; Cao Z
J Chem Phys; 2023 Dec; 159(22):. PubMed ID: 38063222
[TBL] [Abstract][Full Text] [Related]
15. On the kinetic design of transcription.
Höfer T; Rasch MJ
Genome Inform; 2005; 16(1):73-82. PubMed ID: 16362909
[TBL] [Abstract][Full Text] [Related]
16. Quantifying and correcting bias in transcriptional parameter inference from single-cell data.
Grima R; Esmenjaud PM
Biophys J; 2024 Jan; 123(1):4-30. PubMed ID: 37885177
[TBL] [Abstract][Full Text] [Related]
17. Stochastic steady state gain in a gene expression process with mRNA degradation control.
Kuwahara H; Schwartz R
J R Soc Interface; 2012 Jul; 9(72):1589-98. PubMed ID: 22237678
[TBL] [Abstract][Full Text] [Related]
18. Consequences of mRNA transport on stochastic variability in protein levels.
Singh A; Bokes P
Biophys J; 2012 Sep; 103(5):1087-96. PubMed ID: 23009859
[TBL] [Abstract][Full Text] [Related]
19. 3
Cavallaro M; Walsh MD; Jones M; Teahan J; Tiberi S; Finkenstädt B; Hebenstreit D
Genome Biol; 2021 Feb; 22(1):56. PubMed ID: 33541397
[TBL] [Abstract][Full Text] [Related]
20. A geometric analysis of fast-slow models for stochastic gene expression.
Popović N; Marr C; Swain PS
J Math Biol; 2016 Jan; 72(1-2):87-122. PubMed ID: 25833185
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]