BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

186 related articles for article (PubMed ID: 32840625)

  • 1. Sensitive, Highly Multiplexed Sequencing of Microhaplotypes From the Plasmodium falciparum Heterozygome.
    Tessema SK; Hathaway NJ; Teyssier NB; Murphy M; Chen A; Aydemir O; Duarte EM; Simone W; Colborn J; Saute F; Crawford E; Aide P; Bailey JA; Greenhouse B
    J Infect Dis; 2022 Apr; 225(7):1227-1237. PubMed ID: 32840625
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Multiplicity and molecular epidemiology of Plasmodium vivax and Plasmodium falciparum infections in East Africa.
    Zhong D; Lo E; Wang X; Yewhalaw D; Zhou G; Atieli HE; Githeko A; Hemming-Schroeder E; Lee MC; Afrane Y; Yan G
    Malar J; 2018 May; 17(1):185. PubMed ID: 29720181
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Detection of low-density Plasmodium falciparum infections using amplicon deep sequencing.
    Early AM; Daniels RF; Farrell TM; Grimsby J; Volkman SK; Wirth DF; MacInnis BL; Neafsey DE
    Malar J; 2019 Jul; 18(1):219. PubMed ID: 31262308
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A deep sequencing approach to estimate Plasmodium falciparum complexity of infection (COI) and explore apical membrane antigen 1 diversity.
    Miller RH; Hathaway NJ; Kharabora O; Mwandagalirwa K; Tshefu A; Meshnick SR; Taylor SM; Juliano JJ; Stewart VA; Bailey JA
    Malar J; 2017 Dec; 16(1):490. PubMed ID: 29246158
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Development of a new barcode-based, multiplex-PCR, next-generation-sequencing assay and data processing and analytical pipeline for multiplicity of infection detection of Plasmodium falciparum.
    Mitchell RM; Zhou Z; Sheth M; Sergent S; Frace M; Nayak V; Hu B; Gimnig J; Ter Kuile F; Lindblade K; Slutsker L; Hamel MJ; Desai M; Otieno K; Kariuki S; Vigfusson Y; Shi YP
    Malar J; 2021 Feb; 20(1):92. PubMed ID: 33593329
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Evaluation of a parasite-density based pooled targeted amplicon deep sequencing (TADS) method for molecular surveillance of Plasmodium falciparum drug resistance genes in Haiti.
    Louha S; Herman C; Gupta M; Patel D; Kelley J; Oh JM; Guru J; Lemoine JF; Chang MA; Venkatachalam U; Rogier E; Talundzic E
    PLoS One; 2022; 17(1):e0262616. PubMed ID: 35030215
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A novel method for extracting nucleic acids from dried blood spots for ultrasensitive detection of low-density Plasmodium falciparum and Plasmodium vivax infections.
    Zainabadi K; Adams M; Han ZY; Lwin HW; Han KT; Ouattara A; Thura S; Plowe CV; Nyunt MM
    Malar J; 2017 Sep; 16(1):377. PubMed ID: 28923054
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Using a mobile nanopore sequencing lab for end-to-end genomic surveillance of Plasmodium falciparum: A feasibility study.
    Holzschuh A; Lerch A; Fakih BS; Aliy SM; Ali MH; Ali MA; Bruzzese DJ; Yukich J; Hetzel MW; Koepfli C
    PLOS Glob Public Health; 2024; 4(2):e0002743. PubMed ID: 38300956
    [TBL] [Abstract][Full Text] [Related]  

  • 9. 5WBF: a low-cost and straightforward whole blood filtration method suitable for whole-genome sequencing of Plasmodium falciparum clinical isolates.
    Coppée R; Mama A; Sarrasin V; Kamaliddin C; Adoux L; Palazzo L; Ndam NT; Letourneur F; Ariey F; Houzé S; Clain J
    Malar J; 2022 Feb; 21(1):51. PubMed ID: 35172825
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Whole genome sequencing of Plasmodium falciparum from dried blood spots using selective whole genome amplification.
    Oyola SO; Ariani CV; Hamilton WL; Kekre M; Amenga-Etego LN; Ghansah A; Rutledge GG; Redmond S; Manske M; Jyothi D; Jacob CG; Otto TD; Rockett K; Newbold CI; Berriman M; Kwiatkowski DP
    Malar J; 2016 Dec; 15(1):597. PubMed ID: 27998271
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Development of amplicon deep sequencing markers and data analysis pipeline for genotyping multi-clonal malaria infections.
    Lerch A; Koepfli C; Hofmann NE; Messerli C; Wilcox S; Kattenberg JH; Betuela I; O'Connor L; Mueller I; Felger I
    BMC Genomics; 2017 Nov; 18(1):864. PubMed ID: 29132317
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A novel metabarcoded 18S ribosomal DNA sequencing tool for the detection of Plasmodium species in malaria positive patients.
    Wahab A; Shaukat A; Ali Q; Hussain M; Khan TA; Khan MAU; Rashid I; Saleem MA; Evans M; Sargison ND; Chaudhry U
    Infect Genet Evol; 2020 Aug; 82():104305. PubMed ID: 32247865
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Drug-resistant genotypes and multi-clonality in Plasmodium falciparum analysed by direct genome sequencing from peripheral blood of malaria patients.
    Robinson T; Campino SG; Auburn S; Assefa SA; Polley SD; Manske M; MacInnis B; Rockett KA; Maslen GL; Sanders M; Quail MA; Chiodini PL; Kwiatkowski DP; Clark TG; Sutherland CJ
    PLoS One; 2011; 6(8):e23204. PubMed ID: 21853089
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Overlap Extension Barcoding for the Next Generation Sequencing and Genotyping of Plasmodium falciparum in Individual Patients in Western Kenya.
    Levitt B; Obala A; Langdon S; Corcoran D; O'Meara WP; Taylor SM
    Sci Rep; 2017 Jan; 7():41108. PubMed ID: 28117350
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Comparative analysis of targeted next-generation sequencing for Plasmodium falciparum drug resistance markers.
    Kunasol C; Dondorp AM; Batty EM; Nakhonsri V; Sinjanakhom P; Day NPJ; Imwong M
    Sci Rep; 2022 Apr; 12(1):5563. PubMed ID: 35365711
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Flexible and cost-effective genomic surveillance of P. falciparum malaria with targeted nanopore sequencing.
    de Cesare M; Mwenda M; Jeffreys AE; Chirwa J; Drakeley C; Schneider K; Mambwe B; Glanz K; Ntalla C; Carrasquilla M; Portugal S; Verity RJ; Bailey JA; Ghinai I; Busby GB; Hamainza B; Hawela M; Bridges DJ; Hendry JA
    Nat Commun; 2024 Feb; 15(1):1413. PubMed ID: 38360754
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A Method for Amplicon Deep Sequencing of Drug Resistance Genes in Plasmodium falciparum Clinical Isolates from India.
    Rao PN; Uplekar S; Kayal S; Mallick PK; Bandyopadhyay N; Kale S; Singh OP; Mohanty A; Mohanty S; Wassmer SC; Carlton JM
    J Clin Microbiol; 2016 Jun; 54(6):1500-1511. PubMed ID: 27008882
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Using the Plasmodium mitochondrial genome for classifying mixed-species infections and inferring the geographical origin of P. falciparum parasites imported to the U.S.
    Schmedes SE; Patel D; Kelley J; Udhayakumar V; Talundzic E
    PLoS One; 2019; 14(4):e0215754. PubMed ID: 31039178
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Molecular methods for tracking residual Plasmodium falciparum transmission in a close-to-elimination setting in Zanzibar.
    Grossenbacher B; Holzschuh A; Hofmann NE; Omar KA; Stuck L; Fakih BS; Ali A; Yukich J; Hetzel MW; Felger I
    Malar J; 2020 Jan; 19(1):50. PubMed ID: 31996210
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Direct whole-genome sequencing of Plasmodium falciparum specimens from dried erythrocyte spots.
    Nag S; Kofoed PE; Ursing J; Lemvigh CK; Allesøe RL; Rodrigues A; Svendsen CA; Jensen JD; Alifrangis M; Lund O; Aarestrup FM
    Malar J; 2018 Feb; 17(1):91. PubMed ID: 29471822
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.