BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

205 related articles for article (PubMed ID: 32853297)

  • 1. The roles of replication-transcription conflict in mutagenesis and evolution of genome organization.
    Schroeder JW; Sankar TS; Wang JD; Simmons LA
    PLoS Genet; 2020 Aug; 16(8):e1008987. PubMed ID: 32853297
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Accelerated gene evolution through replication-transcription conflicts.
    Paul S; Million-Weaver S; Chattopadhyay S; Sokurenko E; Merrikh H
    Nature; 2013 Mar; 495(7442):512-5. PubMed ID: 23538833
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Origin, evolution, and maintenance of gene-strand bias in bacteria.
    Atre M; Joshi B; Babu J; Sawant S; Sharma S; Sankar TS
    Nucleic Acids Res; 2024 Apr; 52(7):3493-3509. PubMed ID: 38442257
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Why are genes encoded on the lagging strand of the bacterial genome?
    Chen X; Zhang J
    Genome Biol Evol; 2013; 5(12):2436-9. PubMed ID: 24273314
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Spatial and Temporal Control of Evolution through Replication-Transcription Conflicts.
    Merrikh H
    Trends Microbiol; 2017 Jul; 25(7):515-521. PubMed ID: 28216294
    [TBL] [Abstract][Full Text] [Related]  

  • 6. The Accelerated Evolution of Lagging Strand Genes Is Independent of Sequence Context.
    Merrikh CN; Weiss E; Merrikh H
    Genome Biol Evol; 2016 Dec; 8(12):3696-3702. PubMed ID: 28039230
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The B. subtilis Accessory Helicase PcrA Facilitates DNA Replication through Transcription Units.
    Merrikh CN; Brewer BJ; Merrikh H
    PLoS Genet; 2015 Jun; 11(6):e1005289. PubMed ID: 26070154
    [TBL] [Abstract][Full Text] [Related]  

  • 8. DNA Replication-Transcription Conflicts Do Not Significantly Contribute to Spontaneous Mutations Due to Replication Errors in Escherichia coli.
    Foster PL; Niccum BA; Lee H
    mBio; 2021 Oct; 12(5):e0250321. PubMed ID: 34634932
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The Clash of Macromolecular Titans: Replication-Transcription Conflicts in Bacteria.
    Lang KS; Merrikh H
    Annu Rev Microbiol; 2018 Sep; 72():71-88. PubMed ID: 29856930
    [TBL] [Abstract][Full Text] [Related]  

  • 10. On the evolution of chromosomal regions with high gene strand bias in bacteria.
    Tomasch J; Kopejtka K; Shivaramu S; Mujakić I; Koblížek M
    mBio; 2024 Jun; 15(6):e0060224. PubMed ID: 38752745
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Gene inversion potentiates bacterial evolvability and virulence.
    Merrikh CN; Merrikh H
    Nat Commun; 2018 Nov; 9(1):4662. PubMed ID: 30405125
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Non-Random Inversion Landscapes in Prokaryotic Genomes Are Shaped by Heterogeneous Selection Pressures.
    Repar J; Warnecke T
    Mol Biol Evol; 2017 Aug; 34(8):1902-1911. PubMed ID: 28407093
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Transcription-Replication Conflict Orientation Modulates R-Loop Levels and Activates Distinct DNA Damage Responses.
    Hamperl S; Bocek MJ; Saldivar JC; Swigut T; Cimprich KA
    Cell; 2017 Aug; 170(4):774-786.e19. PubMed ID: 28802045
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The nature of mutations induced by replication–transcription collisions.
    Sankar TS; Wastuwidyaningtyas BD; Dong Y; Lewis SA; Wang JD
    Nature; 2016 Jul; 535(7610):178-81. PubMed ID: 27362223
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Replication-transcription conflicts in bacteria.
    Merrikh H; Zhang Y; Grossman AD; Wang JD
    Nat Rev Microbiol; 2012 Jun; 10(7):449-58. PubMed ID: 22669220
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Co-orientation of replication and transcription preserves genome integrity.
    Srivatsan A; Tehranchi A; MacAlpine DM; Wang JD
    PLoS Genet; 2010 Jan; 6(1):e1000810. PubMed ID: 20090829
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Replication-associated gene dosage effects shape the genomes of fast-growing bacteria but only for transcription and translation genes.
    Couturier E; Rocha EP
    Mol Microbiol; 2006 Mar; 59(5):1506-18. PubMed ID: 16468991
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Topological stress is responsible for the detrimental outcomes of head-on replication-transcription conflicts.
    Lang KS; Merrikh H
    Cell Rep; 2021 Mar; 34(9):108797. PubMed ID: 33657379
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Laboratory Evolution Experiments Help Identify a Predominant Region of Constitutive Stable DNA Replication Initiation.
    Veetil RT; Malhotra N; Dubey A; Seshasayee ASN
    mSphere; 2020 Feb; 5(1):. PubMed ID: 32102945
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Replication Restart after Replication-Transcription Conflicts Requires RecA in Bacillus subtilis.
    Million-Weaver S; Samadpour AN; Merrikh H
    J Bacteriol; 2015 Jul; 197(14):2374-82. PubMed ID: 25939832
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.