729 related articles for article (PubMed ID: 32858223)
1. hTFtarget: A Comprehensive Database for Regulations of Human Transcription Factors and Their Targets.
Zhang Q; Liu W; Zhang HM; Xie GY; Miao YR; Xia M; Guo AY
Genomics Proteomics Bioinformatics; 2020 Apr; 18(2):120-128. PubMed ID: 32858223
[TBL] [Abstract][Full Text] [Related]
2. TFTG: A comprehensive database for human transcription factors and their targets.
Zhou X; Zhou L; Qian F; Chen J; Zhang Y; Yu Z; Zhang J; Yang Y; Li Y; Song C; Wang Y; Shang D; Dong L; Zhu J; Li C; Wang Q
Comput Struct Biotechnol J; 2024 Dec; 23():1877-1885. PubMed ID: 38707542
[TBL] [Abstract][Full Text] [Related]
3. TransmiR v2.0: an updated transcription factor-microRNA regulation database.
Tong Z; Cui Q; Wang J; Zhou Y
Nucleic Acids Res; 2019 Jan; 47(D1):D253-D258. PubMed ID: 30371815
[TBL] [Abstract][Full Text] [Related]
4. AnimalTFDB 3.0: a comprehensive resource for annotation and prediction of animal transcription factors.
Hu H; Miao YR; Jia LH; Yu QY; Zhang Q; Guo AY
Nucleic Acids Res; 2019 Jan; 47(D1):D33-D38. PubMed ID: 30204897
[TBL] [Abstract][Full Text] [Related]
5. Transcription factor-binding k-mer analysis clarifies the cell type dependency of binding specificities and cis-regulatory SNPs in humans.
Tahara S; Tsuchiya T; Matsumoto H; Ozaki H
BMC Genomics; 2023 Oct; 24(1):597. PubMed ID: 37805453
[TBL] [Abstract][Full Text] [Related]
6. ChIPBase: a database for decoding the transcriptional regulation of long non-coding RNA and microRNA genes from ChIP-Seq data.
Yang JH; Li JH; Jiang S; Zhou H; Qu LH
Nucleic Acids Res; 2013 Jan; 41(Database issue):D177-87. PubMed ID: 23161675
[TBL] [Abstract][Full Text] [Related]
7. Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data.
Zhang L; Xue G; Liu J; Li Q; Wang Y
BMC Genomics; 2018 Dec; 19(Suppl 10):914. PubMed ID: 30598100
[TBL] [Abstract][Full Text] [Related]
8. AnimalTFDB 2.0: a resource for expression, prediction and functional study of animal transcription factors.
Zhang HM; Liu T; Liu CJ; Song S; Zhang X; Liu W; Jia H; Xue Y; Guo AY
Nucleic Acids Res; 2015 Jan; 43(Database issue):D76-81. PubMed ID: 25262351
[TBL] [Abstract][Full Text] [Related]
9. AnimalTFDB 4.0: a comprehensive animal transcription factor database updated with variation and expression annotations.
Shen WK; Chen SY; Gan ZQ; Zhang YZ; Yue T; Chen MM; Xue Y; Hu H; Guo AY
Nucleic Acids Res; 2023 Jan; 51(D1):D39-D45. PubMed ID: 36268869
[TBL] [Abstract][Full Text] [Related]
10. A map of direct TF-DNA interactions in the human genome.
Gheorghe M; Sandve GK; Khan A; Chèneby J; Ballester B; Mathelier A
Nucleic Acids Res; 2019 Feb; 47(4):e21. PubMed ID: 30517703
[TBL] [Abstract][Full Text] [Related]
11. PlantPAN3.0: a new and updated resource for reconstructing transcriptional regulatory networks from ChIP-seq experiments in plants.
Chow CN; Lee TY; Hung YC; Li GZ; Tseng KC; Liu YH; Kuo PL; Zheng HQ; Chang WC
Nucleic Acids Res; 2019 Jan; 47(D1):D1155-D1163. PubMed ID: 30395277
[TBL] [Abstract][Full Text] [Related]
12. KnockTF: a comprehensive human gene expression profile database with knockdown/knockout of transcription factors.
Feng C; Song C; Liu Y; Qian F; Gao Y; Ning Z; Wang Q; Jiang Y; Li Y; Li M; Chen J; Zhang J; Li C
Nucleic Acids Res; 2020 Jan; 48(D1):D93-D100. PubMed ID: 31598675
[TBL] [Abstract][Full Text] [Related]
13. Inferring condition-specific targets of human TF-TF complexes using ChIP-seq data.
Yang CC; Chen MH; Lin SY; Andrews EH; Cheng C; Liu CC; Chen JJ
BMC Genomics; 2017 Jan; 18(1):61. PubMed ID: 28068916
[TBL] [Abstract][Full Text] [Related]
14. ChIPBase v2.0: decoding transcriptional regulatory networks of non-coding RNAs and protein-coding genes from ChIP-seq data.
Zhou KR; Liu S; Sun WJ; Zheng LL; Zhou H; Yang JH; Qu LH
Nucleic Acids Res; 2017 Jan; 45(D1):D43-D50. PubMed ID: 27924033
[TBL] [Abstract][Full Text] [Related]
15. TF-Marker: a comprehensive manually curated database for transcription factors and related markers in specific cell and tissue types in human.
Xu M; Bai X; Ai B; Zhang G; Song C; Zhao J; Wang Y; Wei L; Qian F; Li Y; Zhou X; Zhou L; Yang Y; Chen J; Liu J; Shang D; Wang X; Zhao Y; Huang X; Zheng Y; Zhang J; Wang Q; Li C
Nucleic Acids Res; 2022 Jan; 50(D1):D402-D412. PubMed ID: 34986601
[TBL] [Abstract][Full Text] [Related]
16. A biophysical model for analysis of transcription factor interaction and binding site arrangement from genome-wide binding data.
He X; Chen CC; Hong F; Fang F; Sinha S; Ng HH; Zhong S
PLoS One; 2009 Dec; 4(12):e8155. PubMed ID: 19956545
[TBL] [Abstract][Full Text] [Related]
17. iTAR: a web server for identifying target genes of transcription factors using ChIP-seq or ChIP-chip data.
Yang CC; Andrews EH; Chen MH; Wang WY; Chen JJ; Gerstein M; Liu CC; Cheng C
BMC Genomics; 2016 Aug; 17(1):632. PubMed ID: 27519564
[TBL] [Abstract][Full Text] [Related]
18. SEGreg: a database for human specifically expressed genes and their regulations in cancer and normal tissue.
Tang Q; Zhang Q; Lv Y; Miao YR; Guo AY
Brief Bioinform; 2019 Jul; 20(4):1322-1328. PubMed ID: 29309507
[TBL] [Abstract][Full Text] [Related]
19. Probing transcription factor combinatorics in different promoter classes and in enhancers.
Vandel J; Cassan O; Lèbre S; Lecellier CH; Bréhélin L
BMC Genomics; 2019 Feb; 20(1):103. PubMed ID: 30709337
[TBL] [Abstract][Full Text] [Related]
20. FFLtool: a web server for transcription factor and miRNA feed forward loop analysis in human.
Xie GY; Xia M; Miao YR; Luo M; Zhang Q; Guo AY
Bioinformatics; 2020 Apr; 36(8):2605-2607. PubMed ID: 31830251
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
