These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

194 related articles for article (PubMed ID: 32903284)

  • 1. Assessment of transcriptomic constraint-based methods for central carbon flux inference.
    Bhadra-Lobo S; Kim MK; Lun DS
    PLoS One; 2020; 15(9):e0238689. PubMed ID: 32903284
    [TBL] [Abstract][Full Text] [Related]  

  • 2. E-Flux2 and SPOT: Validated Methods for Inferring Intracellular Metabolic Flux Distributions from Transcriptomic Data.
    Kim MK; Lane A; Kelley JJ; Lun DS
    PLoS One; 2016; 11(6):e0157101. PubMed ID: 27327084
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A High-Quality Genome-Scale Model for
    Roell GW; Schenk C; Anthony WE; Carr RR; Ponukumati A; Kim J; Akhmatskaya E; Foston M; Dantas G; Moon TS; Tang YJ; García Martín H
    ACS Synth Biol; 2023 Jun; 12(6):1632-1644. PubMed ID: 37186551
    [No Abstract]   [Full Text] [Related]  

  • 4. Integrating proteomic or transcriptomic data into metabolic models using linear bound flux balance analysis.
    Tian M; Reed JL
    Bioinformatics; 2018 Nov; 34(22):3882-3888. PubMed ID: 29878053
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Predicting internal cell fluxes at sub-optimal growth.
    Schultz A; Qutub AA
    BMC Syst Biol; 2015 Apr; 9():18. PubMed ID: 25890056
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Model validation and selection in metabolic flux analysis and flux balance analysis.
    Kaste JAM; Shachar-Hill Y
    Biotechnol Prog; 2024; 40(1):e3413. PubMed ID: 37997613
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Non-stationary (13)C-metabolic flux ratio analysis.
    Hörl M; Schnidder J; Sauer U; Zamboni N
    Biotechnol Bioeng; 2013 Dec; 110(12):3164-76. PubMed ID: 23860906
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Model Validation and Selection in Metabolic Flux Analysis and Flux Balance Analysis.
    Kaste JAM; Shachar-Hill Y
    ArXiv; 2023 Mar; ():. PubMed ID: 36994165
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Systematic evaluation of methods for integration of transcriptomic data into constraint-based models of metabolism.
    Machado D; Herrgård M
    PLoS Comput Biol; 2014 Apr; 10(4):e1003580. PubMed ID: 24762745
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A Method to Constrain Genome-Scale Models with 13C Labeling Data.
    Martín HG; Kumar VS; Weaver D; Ghosh A; Chubukov V; Mukhopadhyay A; Arkin A; Keasling JD
    PLoS Comput Biol; 2015 Sep; 11(9):e1004363. PubMed ID: 26379153
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Rapid Prediction of Bacterial Heterotrophic Fluxomics Using Machine Learning and Constraint Programming.
    Wu SG; Wang Y; Jiang W; Oyetunde T; Yao R; Zhang X; Shimizu K; Tang YJ; Bao FS
    PLoS Comput Biol; 2016 Apr; 12(4):e1004838. PubMed ID: 27092947
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Genome-Scale
    Ando D; García Martín H
    Methods Mol Biol; 2019; 1859():317-345. PubMed ID: 30421239
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Linear programming based gene expression model (LPM-GEM) predicts the carbon source for Bacillus subtilis.
    Thanamit K; Hoerhold F; Oswald M; Koenig R
    BMC Bioinformatics; 2022 Jun; 23(1):226. PubMed ID: 35689204
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Estimating Metabolic Fluxes Using a Maximum Network Flexibility Paradigm.
    Megchelenbrink W; Rossell S; Huynen MA; Notebaart RA; Marchiori E
    PLoS One; 2015; 10(10):e0139665. PubMed ID: 26457579
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Accurate flux predictions using tissue-specific gene expression in plant metabolic modeling.
    Kaste JAM; Shachar-Hill Y
    Bioinformatics; 2023 May; 39(5):. PubMed ID: 37040081
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Metabolic flux analysis in Escherichia coli by integrating isotopic dynamic and isotopic stationary 13C labeling data.
    Schaub J; Mauch K; Reuss M
    Biotechnol Bioeng; 2008 Apr; 99(5):1170-85. PubMed ID: 17972325
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Parallel labeling experiments with [U-13C]glucose validate E. coli metabolic network model for 13C metabolic flux analysis.
    Leighty RW; Antoniewicz MR
    Metab Eng; 2012 Sep; 14(5):533-41. PubMed ID: 22771935
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A simulation-free constrained regression approach for flux estimation in isotopically nonstationary metabolic flux analysis with applications in microalgae.
    Küken A; Treves H; Nikoloski Z
    Front Plant Sci; 2023; 14():1140829. PubMed ID: 38078077
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Integration of enzymatic data in Bacillus subtilis genome-scale metabolic model improves phenotype predictions and enables in silico design of poly-γ-glutamic acid production strains.
    Massaiu I; Pasotti L; Sonnenschein N; Rama E; Cavaletti M; Magni P; Calvio C; Herrgård MJ
    Microb Cell Fact; 2019 Jan; 18(1):3. PubMed ID: 30626384
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Genomic, transcriptomic, and metabolic characterizations of Escherichia coli adapted to branched-chain higher alcohol tolerance.
    Wang B; Guo Y; Xu Z; Tu R; Wang Q
    Appl Microbiol Biotechnol; 2020 May; 104(9):4171-4184. PubMed ID: 32189046
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.