160 related articles for article (PubMed ID: 32917861)
1. Hyperacetylated chromatin domains mark cell type-specific genes and suggest distinct modes of enhancer function.
Fox S; Myers JA; Davidson C; Getman M; Kingsley PD; Frankiewicz N; Bulger M
Nat Commun; 2020 Sep; 11(1):4544. PubMed ID: 32917861
[TBL] [Abstract][Full Text] [Related]
2. Chromatin interaction networks revealed unique connectivity patterns of broad H3K4me3 domains and super enhancers in 3D chromatin.
Thibodeau A; Márquez EJ; Shin DG; Vera-Licona P; Ucar D
Sci Rep; 2017 Oct; 7(1):14466. PubMed ID: 29089515
[TBL] [Abstract][Full Text] [Related]
3. Chromatin proteomics reveals novel combinatorial histone modification signatures that mark distinct subpopulations of macrophage enhancers.
Soldi M; Mari T; Nicosia L; Musiani D; Sigismondo G; Cuomo A; Pavesi G; Bonaldi T
Nucleic Acids Res; 2017 Dec; 45(21):12195-12213. PubMed ID: 28981749
[TBL] [Abstract][Full Text] [Related]
4. The hyper-activation of transcriptional enhancers in breast cancer.
Li QL; Wang DY; Ju LG; Yao J; Gao C; Lei PJ; Li LY; Zhao XL; Wu M
Clin Epigenetics; 2019 Mar; 11(1):48. PubMed ID: 30867030
[TBL] [Abstract][Full Text] [Related]
5. The interdependence of mammary-specific super-enhancers and their native promoters facilitates gene activation during pregnancy.
Zeng X; Lee HK; Wang C; Achikeh P; Liu C; Hennighausen L
Exp Mol Med; 2020 Apr; 52(4):682-690. PubMed ID: 32321991
[TBL] [Abstract][Full Text] [Related]
6. Locus-specific editing of histone modifications at endogenous enhancers.
Mendenhall EM; Williamson KE; Reyon D; Zou JY; Ram O; Joung JK; Bernstein BE
Nat Biotechnol; 2013 Dec; 31(12):1133-6. PubMed ID: 24013198
[TBL] [Abstract][Full Text] [Related]
7. Integrative epigenomic and high-throughput functional enhancer profiling reveals determinants of enhancer heterogeneity in gastric cancer.
Sheng T; Ho SWT; Ooi WF; Xu C; Xing M; Padmanabhan N; Huang KK; Ma L; Ray M; Guo YA; Sim NL; Anene-Nzelu CG; Chang MM; Razavi-Mohseni M; Beer MA; Foo RSY; Sundar R; Chan YH; Tan ALK; Ong X; Skanderup AJ; White KP; Jha S; Tan P
Genome Med; 2021 Oct; 13(1):158. PubMed ID: 34635154
[TBL] [Abstract][Full Text] [Related]
8. Dynamic regulation of histone modifications and long-range chromosomal interactions during postmitotic transcriptional reactivation.
Kang H; Shokhirev MN; Xu Z; Chandran S; Dixon JR; Hetzer MW
Genes Dev; 2020 Jul; 34(13-14):913-930. PubMed ID: 32499403
[TBL] [Abstract][Full Text] [Related]
9. An atlas of dynamic chromatin landscapes in mouse fetal development.
Gorkin DU; Barozzi I; Zhao Y; Zhang Y; Huang H; Lee AY; Li B; Chiou J; Wildberg A; Ding B; Zhang B; Wang M; Strattan JS; Davidson JM; Qiu Y; Afzal V; Akiyama JA; Plajzer-Frick I; Novak CS; Kato M; Garvin TH; Pham QT; Harrington AN; Mannion BJ; Lee EA; Fukuda-Yuzawa Y; He Y; Preissl S; Chee S; Han JY; Williams BA; Trout D; Amrhein H; Yang H; Cherry JM; Wang W; Gaulton K; Ecker JR; Shen Y; Dickel DE; Visel A; Pennacchio LA; Ren B
Nature; 2020 Jul; 583(7818):744-751. PubMed ID: 32728240
[TBL] [Abstract][Full Text] [Related]
10. Peak-valley-peak pattern of histone modifications delineates active regulatory elements and their directionality.
Pundhir S; Bagger FO; Lauridsen FB; Rapin N; Porse BT
Nucleic Acids Res; 2016 May; 44(9):4037-51. PubMed ID: 27095194
[TBL] [Abstract][Full Text] [Related]
11. Broad H3K4me3 domains: Maintaining cellular identity and their implication in super-enhancer hijacking.
Kent D; Marchetti L; Mikulasova A; Russell LJ; Rico D
Bioessays; 2023 Oct; 45(10):e2200239. PubMed ID: 37350339
[TBL] [Abstract][Full Text] [Related]
12. Enhancer prediction in the human genome by probabilistic modelling of the chromatin feature patterns.
Osmala M; Lähdesmäki H
BMC Bioinformatics; 2020 Jul; 21(1):317. PubMed ID: 32689977
[TBL] [Abstract][Full Text] [Related]
13. Enhancer occlusion transcripts regulate the activity of human enhancer domains via transcriptional interference: a computational perspective.
Pande A; Makalowski W; Brosius J; Raabe CA
Nucleic Acids Res; 2020 Apr; 48(7):3435-3454. PubMed ID: 32133533
[TBL] [Abstract][Full Text] [Related]
14. Genomic targeting of methylated DNA: influence of methylation on transcription, replication, chromatin structure, and histone acetylation.
Schübeler D; Lorincz MC; Cimbora DM; Telling A; Feng YQ; Bouhassira EE; Groudine M
Mol Cell Biol; 2000 Dec; 20(24):9103-12. PubMed ID: 11094062
[TBL] [Abstract][Full Text] [Related]
15. Super-Enhancers and Broad H3K4me3 Domains Form Complex Gene Regulatory Circuits Involving Chromatin Interactions.
Cao F; Fang Y; Tan HK; Goh Y; Choy JYH; Koh BTH; Hao Tan J; Bertin N; Ramadass A; Hunter E; Green J; Salter M; Akoulitchev A; Wang W; Chng WJ; Tenen DG; Fullwood MJ
Sci Rep; 2017 May; 7(1):2186. PubMed ID: 28526829
[TBL] [Abstract][Full Text] [Related]
16. Coregulator recruitment and histone modifications in transcriptional regulation by the androgen receptor.
Kang Z; Jänne OA; Palvimo JJ
Mol Endocrinol; 2004 Nov; 18(11):2633-48. PubMed ID: 15308689
[TBL] [Abstract][Full Text] [Related]
17. A model of active transcription hubs that unifies the roles of active promoters and enhancers.
Zhu I; Song W; Ovcharenko I; Landsman D
Nucleic Acids Res; 2021 May; 49(8):4493-4505. PubMed ID: 33872375
[TBL] [Abstract][Full Text] [Related]
18. ChromaSig: a probabilistic approach to finding common chromatin signatures in the human genome.
Hon G; Ren B; Wang W
PLoS Comput Biol; 2008 Oct; 4(10):e1000201. PubMed ID: 18927605
[TBL] [Abstract][Full Text] [Related]
19. Differential analysis of chromatin accessibility and histone modifications for predicting mouse developmental enhancers.
Fu S; Wang Q; Moore JE; Purcaro MJ; Pratt HE; Fan K; Gu C; Jiang C; Zhu R; Kundaje A; Lu A; Weng Z
Nucleic Acids Res; 2018 Nov; 46(21):11184-11201. PubMed ID: 30137428
[TBL] [Abstract][Full Text] [Related]
20. Evaluating Enhancer Function and Transcription.
Field A; Adelman K
Annu Rev Biochem; 2020 Jun; 89():213-234. PubMed ID: 32197056
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
