These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
113 related articles for article (PubMed ID: 32926365)
1. Accessible Pipeline for Translational Research Using TCGA: Examples of Relating Gene Mechanism to Disease-Specific Outcomes. Berglund AE; Putney RM; Creed JH; Aden-Buie G; Gerke TA; Rounbehler RJ Methods Mol Biol; 2021; 2194():127-142. PubMed ID: 32926365 [TBL] [Abstract][Full Text] [Related]
2. A survey and evaluation of Web-based tools/databases for variant analysis of TCGA data. Zhang Z; Li H; Jiang S; Li R; Li W; Chen H; Bo X Brief Bioinform; 2019 Jul; 20(4):1524-1541. PubMed ID: 29617727 [TBL] [Abstract][Full Text] [Related]
3. Making Use of Cancer Genomic Databases. Creighton CJ Curr Protoc Mol Biol; 2018 Jan; 121():19.14.1-19.14.13. PubMed ID: 29337373 [TBL] [Abstract][Full Text] [Related]
4. Web-TCGA: an online platform for integrated analysis of molecular cancer data sets. Deng M; Brägelmann J; Schultze JL; Perner S BMC Bioinformatics; 2016 Feb; 17():72. PubMed ID: 26852330 [TBL] [Abstract][Full Text] [Related]
5. UALCAN: A Portal for Facilitating Tumor Subgroup Gene Expression and Survival Analyses. Chandrashekar DS; Bashel B; Balasubramanya SAH; Creighton CJ; Ponce-Rodriguez I; Chakravarthi BVSK; Varambally S Neoplasia; 2017 Aug; 19(8):649-658. PubMed ID: 28732212 [TBL] [Abstract][Full Text] [Related]
6. MEXPRESS update 2019. Koch A; Jeschke J; Van Criekinge W; van Engeland M; De Meyer T Nucleic Acids Res; 2019 Jul; 47(W1):W561-W565. PubMed ID: 31114869 [TBL] [Abstract][Full Text] [Related]
7. A Practical Guide to The Cancer Genome Atlas (TCGA). Wang Z; Jensen MA; Zenklusen JC Methods Mol Biol; 2016; 1418():111-41. PubMed ID: 27008012 [TBL] [Abstract][Full Text] [Related]
9. TCGA Expedition: A Data Acquisition and Management System for TCGA Data. Chandran UR; Medvedeva OP; Barmada MM; Blood PD; Chakka A; Luthra S; Ferreira A; Wong KF; Lee AV; Zhang Z; Budden R; Scott JR; Berndt A; Berg JM; Jacobson RS PLoS One; 2016; 11(10):e0165395. PubMed ID: 27788220 [TBL] [Abstract][Full Text] [Related]
10. TCGA4U: A Web-Based Genomic Analysis Platform To Explore And Mine TCGA Genomic Data For Translational Research. Huang Z; Duan H; Li H Stud Health Technol Inform; 2015; 216():658-62. PubMed ID: 26262133 [TBL] [Abstract][Full Text] [Related]
11. GS-TCGA: Gene Set-Based Analysis of The Cancer Genome Atlas. Baird T; Roychoudhuri R J Comput Biol; 2024 Mar; 31(3):229-240. PubMed ID: 38436570 [TBL] [Abstract][Full Text] [Related]
12. MEXPRESS: visualizing expression, DNA methylation and clinical TCGA data. Koch A; De Meyer T; Jeschke J; Van Criekinge W BMC Genomics; 2015 Aug; 16(1):636. PubMed ID: 26306699 [TBL] [Abstract][Full Text] [Related]
13. Assessment of Gene Set Enrichment Analysis using curated RNA-seq-based benchmarks. Candia J; Ferrucci L PLoS One; 2024; 19(5):e0302696. PubMed ID: 38753612 [TBL] [Abstract][Full Text] [Related]
14. TCGAbiolinks: an R/Bioconductor package for integrative analysis of TCGA data. Colaprico A; Silva TC; Olsen C; Garofano L; Cava C; Garolini D; Sabedot TS; Malta TM; Pagnotta SM; Castiglioni I; Ceccarelli M; Bontempi G; Noushmehr H Nucleic Acids Res; 2016 May; 44(8):e71. PubMed ID: 26704973 [TBL] [Abstract][Full Text] [Related]
15. Methylation signature genes identification of cancers occurrence and pattern recognition. Wang X; Shang W; Li X; Chang Y Comput Biol Chem; 2020 Apr; 85():107198. PubMed ID: 32120302 [TBL] [Abstract][Full Text] [Related]