162 related articles for article (PubMed ID: 32963029)
1. Reconstructing double-stranded DNA fragments on a single-molecule level reveals patterns of degradation in ancient samples.
Bokelmann L; Glocke I; Meyer M
Genome Res; 2020 Oct; 30(10):1449-1457. PubMed ID: 32963029
[TBL] [Abstract][Full Text] [Related]
2. A Method for Single-Stranded Ancient DNA Library Preparation.
Gansauge MT; Meyer M
Methods Mol Biol; 2019; 1963():75-83. PubMed ID: 30875046
[TBL] [Abstract][Full Text] [Related]
3. Testing a series of modifications on genomic library preparation methods for ancient or degraded DNA.
Psonis N; Vassou D; Kafetzopoulos D
Anal Biochem; 2021 Jun; 623():114193. PubMed ID: 33831350
[TBL] [Abstract][Full Text] [Related]
4. A ligation-based single-stranded library preparation method to analyze cell-free DNA and synthetic oligos.
Troll CJ; Kapp J; Rao V; Harkins KM; Cole C; Naughton C; Morgan JM; Shapiro B; Green RE
BMC Genomics; 2019 Dec; 20(1):1023. PubMed ID: 31881841
[TBL] [Abstract][Full Text] [Related]
5. Double-Stranded Library Preparation for Ancient and Other Degraded Samples.
Henneberger K; Barlow A; Paijmans JLA
Methods Mol Biol; 2019; 1963():65-73. PubMed ID: 30875045
[TBL] [Abstract][Full Text] [Related]
6. A novel NGS library preparation method to characterize native termini of fragmented DNA.
Harkins KM; Schaefer NK; Troll CJ; Rao V; Kapp J; Naughton C; Shapiro B; Green RE
Nucleic Acids Res; 2020 May; 48(8):e47. PubMed ID: 32112100
[TBL] [Abstract][Full Text] [Related]
7. Manual and automated preparation of single-stranded DNA libraries for the sequencing of DNA from ancient biological remains and other sources of highly degraded DNA.
Gansauge MT; Aximu-Petri A; Nagel S; Meyer M
Nat Protoc; 2020 Aug; 15(8):2279-2300. PubMed ID: 32612278
[TBL] [Abstract][Full Text] [Related]
8. Mining ancient microbiomes using selective enrichment of damaged DNA molecules.
Weiß CL; Gansauge MT; Aximu-Petri A; Meyer M; Burbano HA
BMC Genomics; 2020 Jun; 21(1):432. PubMed ID: 32586278
[TBL] [Abstract][Full Text] [Related]
9. Reconstructing Prehistoric Viral Genomes from Neanderthal Sequencing Data.
Ferreira RC; Alves GV; Ramon M; Antoneli F; Briones MRS
Viruses; 2024 May; 16(6):. PubMed ID: 38932149
[TBL] [Abstract][Full Text] [Related]
10. Patterns of damage in genomic DNA sequences from a Neandertal.
Briggs AW; Stenzel U; Johnson PL; Green RE; Kelso J; Prüfer K; Meyer M; Krause J; Ronan MT; Lachmann M; Pääbo S
Proc Natl Acad Sci U S A; 2007 Sep; 104(37):14616-21. PubMed ID: 17715061
[TBL] [Abstract][Full Text] [Related]
11. True single-molecule DNA sequencing of a pleistocene horse bone.
Orlando L; Ginolhac A; Raghavan M; Vilstrup J; Rasmussen M; Magnussen K; Steinmann KE; Kapranov P; Thompson JF; Zazula G; Froese D; Moltke I; Shapiro B; Hofreiter M; Al-Rasheid KA; Gilbert MT; Willerslev E
Genome Res; 2011 Oct; 21(10):1705-19. PubMed ID: 21803858
[TBL] [Abstract][Full Text] [Related]
12. Analysis of Ancient Microbial DNA.
Gorgé O; Bennett EA; Massilani D; Daligault J; Geigl EM; Grange T
Methods Mol Biol; 2023; 2605():103-131. PubMed ID: 36520391
[TBL] [Abstract][Full Text] [Related]
13. A Fast and Efficient Single-stranded Genomic Library Preparation Method Optimized for Ancient DNA.
Kapp JD; Green RE; Shapiro B
J Hered; 2021 May; 112(3):241-249. PubMed ID: 33768239
[TBL] [Abstract][Full Text] [Related]
14. Single-stranded DNA library preparation for the sequencing of ancient or damaged DNA.
Gansauge MT; Meyer M
Nat Protoc; 2013 Apr; 8(4):737-48. PubMed ID: 23493070
[TBL] [Abstract][Full Text] [Related]
15. Repair of DNA damage caused by cytosine deamination in mitochondrial DNA of forensic case samples.
Gorden EM; Sturk-Andreaggi K; Marshall C
Forensic Sci Int Genet; 2018 May; 34():257-264. PubMed ID: 29573606
[TBL] [Abstract][Full Text] [Related]
16. New insights on single-stranded versus double-stranded DNA library preparation for ancient DNA.
Wales N; Carøe C; Sandoval-Velasco M; Gamba C; Barnett R; Samaniego JA; Madrigal JR; Orlando L; Gilbert MT
Biotechniques; 2015 Dec; 59(6):368-71. PubMed ID: 26651516
[TBL] [Abstract][Full Text] [Related]
17. mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters.
Jónsson H; Ginolhac A; Schubert M; Johnson PL; Orlando L
Bioinformatics; 2013 Jul; 29(13):1682-4. PubMed ID: 23613487
[TBL] [Abstract][Full Text] [Related]
18. Library construction for ancient genomics: single strand or double strand?
Bennett EA; Massilani D; Lizzo G; Daligault J; Geigl EM; Grange T
Biotechniques; 2014 Jun; 56(6):289-90, 292-6, 298, passim. PubMed ID: 24924389
[TBL] [Abstract][Full Text] [Related]
19. Comparison of two ancient DNA extraction protocols for skeletal remains from tropical environments.
Nieves-Colón MA; Ozga AT; Pestle WJ; Cucina A; Tiesler V; Stanton TW; Stone AC
Am J Phys Anthropol; 2018 Aug; 166(4):824-836. PubMed ID: 29603124
[TBL] [Abstract][Full Text] [Related]
20. A sensitive genetic assay for the detection of cytosine deamination: determination of rate constants and the activation energy.
Frederico LA; Kunkel TA; Shaw BR
Biochemistry; 1990 Mar; 29(10):2532-7. PubMed ID: 2185829
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]