168 related articles for article (PubMed ID: 32973081)
1. Quantitative analysis of subcellular distributions with an open-source, object-based tool.
Ryder PV; Lerit DA
Biol Open; 2020 Oct; 9(10):. PubMed ID: 32973081
[TBL] [Abstract][Full Text] [Related]
2. CellWalker: a user-friendly and modular computational pipeline for morphological analysis of microscopy images.
Khare H; Dongo Mendoza N; Zurzolo C
Bioinformatics; 2023 Dec; 39(12):. PubMed ID: 38060265
[TBL] [Abstract][Full Text] [Related]
3. An analytical tool that quantifies cellular morphology changes from three-dimensional fluorescence images.
Haass-Koffler CL; Naeemuddin M; Bartlett SE
J Vis Exp; 2012 Aug; (66):e4233. PubMed ID: 22951512
[TBL] [Abstract][Full Text] [Related]
4. Segmentation and quantification of subcellular structures in fluorescence microscopy images using Squassh.
Rizk A; Paul G; Incardona P; Bugarski M; Mansouri M; Niemann A; Ziegler U; Berger P; Sbalzarini IF
Nat Protoc; 2014 Mar; 9(3):586-96. PubMed ID: 24525752
[TBL] [Abstract][Full Text] [Related]
5. Determining the distribution of probes between different subcellular locations through automated unmixing of subcellular patterns.
Peng T; Bonamy GM; Glory-Afshar E; Rines DR; Chanda SK; Murphy RF
Proc Natl Acad Sci U S A; 2010 Feb; 107(7):2944-9. PubMed ID: 20133616
[TBL] [Abstract][Full Text] [Related]
6. Multi-template matching: a versatile tool for object-localization in microscopy images.
Thomas LSV; Gehrig J
BMC Bioinformatics; 2020 Feb; 21(1):44. PubMed ID: 32024462
[TBL] [Abstract][Full Text] [Related]
7. Bi-channel image registration and deep-learning segmentation (BIRDS) for efficient, versatile 3D mapping of mouse brain.
Wang X; Zeng W; Yang X; Zhang Y; Fang C; Zeng S; Han Y; Fei P
Elife; 2021 Jan; 10():. PubMed ID: 33459255
[TBL] [Abstract][Full Text] [Related]
8. Density Distribution Maps: A Novel Tool for Subcellular Distribution Analysis and Quantitative Biomedical Imaging.
De Santis I; Zanoni M; Arienti C; Bevilacqua A; Tesei A
Sensors (Basel); 2021 Feb; 21(3):. PubMed ID: 33540807
[TBL] [Abstract][Full Text] [Related]
9. GIANI - open-source software for automated analysis of 3D microscopy images.
Barry DJ; Gerri C; Bell DM; D'Antuono R; Niakan KK
J Cell Sci; 2022 May; 135(10):. PubMed ID: 35502739
[TBL] [Abstract][Full Text] [Related]
10. SpotitPy: a semi-automated tool for object-based co-localization of fluorescent labels in microscopy images.
Akalestou-Clocher A; Kalamara V; Topalis P; Garinis GA
BMC Bioinformatics; 2022 Oct; 23(1):439. PubMed ID: 36271369
[TBL] [Abstract][Full Text] [Related]
11. Visualization and correction of automated segmentation, tracking and lineaging from 5-D stem cell image sequences.
Wait E; Winter M; Bjornsson C; Kokovay E; Wang Y; Goderie S; Temple S; Cohen AR
BMC Bioinformatics; 2014 Oct; 15(1):328. PubMed ID: 25281197
[TBL] [Abstract][Full Text] [Related]
12. Using CellX to quantify intracellular events.
Mayer C; Dimopoulos S; Rudolf F; Stelling J
Curr Protoc Mol Biol; 2013; Chapter 14():Unit 14.22.. PubMed ID: 23288460
[TBL] [Abstract][Full Text] [Related]
13. ColocalizR: An open-source application for cell-based high-throughput colocalization analysis.
Sauvat A; Leduc M; Müller K; Kepp O; Kroemer G
Comput Biol Med; 2019 Apr; 107():227-234. PubMed ID: 30852249
[TBL] [Abstract][Full Text] [Related]
14. DiAna, an ImageJ tool for object-based 3D co-localization and distance analysis.
Gilles JF; Dos Santos M; Boudier T; Bolte S; Heck N
Methods; 2017 Feb; 115():55-64. PubMed ID: 27890650
[TBL] [Abstract][Full Text] [Related]
15. FocAn: automated 3D analysis of DNA repair foci in image stacks acquired by confocal fluorescence microscopy.
Memmel S; Sisario D; Zimmermann H; Sauer M; Sukhorukov VL; Djuzenova CS; Flentje M
BMC Bioinformatics; 2020 Jan; 21(1):27. PubMed ID: 31992200
[TBL] [Abstract][Full Text] [Related]
16. Oufti: an integrated software package for high-accuracy, high-throughput quantitative microscopy analysis.
Paintdakhi A; Parry B; Campos M; Irnov I; Elf J; Surovtsev I; Jacobs-Wagner C
Mol Microbiol; 2016 Feb; 99(4):767-77. PubMed ID: 26538279
[TBL] [Abstract][Full Text] [Related]
17. MATtrack: A MATLAB-Based Quantitative Image Analysis Platform for Investigating Real-Time Photo-Converted Fluorescent Signals in Live Cells.
Courtney J; Woods E; Scholz D; Hall WW; Gautier VW
PLoS One; 2015; 10(10):e0140209. PubMed ID: 26485569
[TBL] [Abstract][Full Text] [Related]
18. Basic Image Analysis and Manipulation in ImageJ/Fiji.
Stossi F; Singh PK
Curr Protoc; 2023 Jul; 3(7):e849. PubMed ID: 37498127
[TBL] [Abstract][Full Text] [Related]
19. Polymorph segmentation representation for medical image computing.
Pinter C; Lasso A; Fichtinger G
Comput Methods Programs Biomed; 2019 Apr; 171():19-26. PubMed ID: 30902247
[TBL] [Abstract][Full Text] [Related]
20. Extensible visualization and analysis for multidimensional images using Vaa3D.
Peng H; Bria A; Zhou Z; Iannello G; Long F
Nat Protoc; 2014 Jan; 9(1):193-208. PubMed ID: 24385149
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]