BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

213 related articles for article (PubMed ID: 33106500)

  • 1. Genome-wide identification of accessible chromatin regions in bumblebee by ATAC-seq.
    Zhao X; Su L; Xu W; Schaack S; Sun C
    Sci Data; 2020 Oct; 7(1):367. PubMed ID: 33106500
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Genome-wide analysis of chromatin accessibility using ATAC-seq.
    Shashikant T; Ettensohn CA
    Methods Cell Biol; 2019; 151():219-235. PubMed ID: 30948010
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Mapping Genome-wide Accessible Chromatin in Primary Human T Lymphocytes by ATAC-Seq.
    Grbesa I; Tannenbaum M; Sarusi-Portuguez A; Schwartz M; Hakim O
    J Vis Exp; 2017 Nov; (129):. PubMed ID: 29155775
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Characterization of the accessible genome in the human malaria parasite Plasmodium falciparum.
    Ruiz JL; Tena JJ; Bancells C; Cortés A; Gómez-Skarmeta JL; Gómez-Díaz E
    Nucleic Acids Res; 2018 Oct; 46(18):9414-9431. PubMed ID: 30016465
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Efficient chromatin accessibility mapping in situ by nucleosome-tethered tagmentation.
    Henikoff S; Henikoff JG; Kaya-Okur HS; Ahmad K
    Elife; 2020 Nov; 9():. PubMed ID: 33191916
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Optimization of ATAC-seq in wheat seedling roots using INTACT-isolated nuclei.
    Debernardi JM; Burguener G; Bubb K; Liu Q; Queitsch C; Dubcovsky J
    BMC Plant Biol; 2023 May; 23(1):270. PubMed ID: 37211599
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Identification of Open Chromatin Regions in Plant Genomes Using ATAC-Seq.
    Bajic M; Maher KA; Deal RB
    Methods Mol Biol; 2018; 1675():183-201. PubMed ID: 29052193
    [TBL] [Abstract][Full Text] [Related]  

  • 8. [Advances in assay for transposase-accessible chromatin with high-throughput sequencing].
    Wu J; Quan JP; Ye Y; Wu ZF; Yang J; Yang M; Zheng EQ
    Yi Chuan; 2020 Apr; 42(4):333-346. PubMed ID: 32312702
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Tandem Repeats Contribute to Coding Sequence Variation in Bumblebees (Hymenoptera: Apidae).
    Zhao X; Su L; Schaack S; Sadd BM; Sun C
    Genome Biol Evol; 2018 Dec; 10(12):3176-3187. PubMed ID: 30398620
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Detect accessible chromatin using ATAC-sequencing, from principle to applications.
    Sun Y; Miao N; Sun T
    Hereditas; 2019; 156():29. PubMed ID: 31427911
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ATAC-Seq Analysis of Accessible Chromatin: From Experimental Steps to Data Analysis.
    Tatara M; Ikeda T; Namekawa SH; Maezawa S
    Methods Mol Biol; 2023; 2577():65-81. PubMed ID: 36173566
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Defining Regulatory Elements in the Human Genome Using Nucleosome Occupancy and Methylome Sequencing (NOMe-Seq).
    Rhie SK; Schreiner S; Farnham PJ
    Methods Mol Biol; 2018; 1766():209-229. PubMed ID: 29605855
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Assay for Transposase-Accessible Chromatin with High-Throughput Sequencing (ATAC-Seq) Protocol for Zebrafish Embryos.
    Doganli C; Sandoval M; Thomas S; Hart D
    Methods Mol Biol; 2017; 1507():59-66. PubMed ID: 27832532
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Genome-wide MNase hypersensitivity assay unveils distinct classes of open chromatin associated with H3K27me3 and DNA methylation in Arabidopsis thaliana.
    Zhao H; Zhang W; Zhang T; Lin Y; Hu Y; Fang C; Jiang J
    Genome Biol; 2020 Feb; 21(1):24. PubMed ID: 32014062
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Dissecting the Epigenome Driving Drug Resistance by ATAC-Seq.
    de Nicola F; Corleone G; Goeman F
    Methods Mol Biol; 2022; 2535():171-185. PubMed ID: 35867231
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide.
    Buenrostro JD; Wu B; Chang HY; Greenleaf WJ
    Curr Protoc Mol Biol; 2015 Jan; 109():21.29.1-21.29.9. PubMed ID: 25559105
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Genome-Wide Mapping of Active Regulatory Elements Using ATAC-seq.
    Marinov GK; Shipony Z; Kundaje A; Greenleaf WJ
    Methods Mol Biol; 2023; 2611():3-19. PubMed ID: 36807060
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Combining ATAC-seq with nuclei sorting for discovery of cis-regulatory regions in plant genomes.
    Lu Z; Hofmeister BT; Vollmers C; DuBois RM; Schmitz RJ
    Nucleic Acids Res; 2017 Apr; 45(6):e41. PubMed ID: 27903897
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Analysis of a normalised expressed sequence tag (EST) library from a key pollinator, the bumblebee Bombus terrestris.
    Sadd BM; Kube M; Klages S; Reinhardt R; Schmid-Hempel P
    BMC Genomics; 2010 Feb; 11():110. PubMed ID: 20156341
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Quantification, Dynamic Visualization, and Validation of Bias in ATAC-Seq Data with ataqv.
    Orchard P; Kyono Y; Hensley J; Kitzman JO; Parker SCJ
    Cell Syst; 2020 Mar; 10(3):298-306.e4. PubMed ID: 32213349
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.