236 related articles for article (PubMed ID: 33158461)
1. High-quality bacterial genomes of a partial-nitritation/anammox system by an iterative hybrid assembly method.
Liu L; Wang Y; Che Y; Chen Y; Xia Y; Luo R; Cheng SH; Zheng C; Zhang T
Microbiome; 2020 Nov; 8(1):155. PubMed ID: 33158461
[TBL] [Abstract][Full Text] [Related]
2. Charting the complexity of the activated sludge microbiome through a hybrid sequencing strategy.
Liu L; Wang Y; Yang Y; Wang D; Cheng SH; Zheng C; Zhang T
Microbiome; 2021 Oct; 9(1):205. PubMed ID: 34649602
[TBL] [Abstract][Full Text] [Related]
3. Exploring the effects of operational mode and microbial interactions on bacterial community assembly in a one-stage partial-nitritation anammox reactor using integrated multi-omics.
Wang Y; Niu Q; Zhang X; Liu L; Wang Y; Chen Y; Negi M; Figeys D; Li YY; Zhang T
Microbiome; 2019 Aug; 7(1):122. PubMed ID: 31462278
[TBL] [Abstract][Full Text] [Related]
4. Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces.
Cuscó A; Pérez D; Viñes J; Fàbregas N; Francino O
BMC Genomics; 2021 May; 22(1):330. PubMed ID: 33957869
[TBL] [Abstract][Full Text] [Related]
5. Evaluating
Vosloo S; Huo L; Anderson CL; Dai Z; Sevillano M; Pinto A
Microbiol Spectr; 2021 Dec; 9(3):e0143421. PubMed ID: 34730411
[TBL] [Abstract][Full Text] [Related]
6. Improved Assembly of Metagenome-Assembled Genomes and Viruses in Tibetan Saline Lake Sediment by HiFi Metagenomic Sequencing.
Tao Y; Xun F; Zhao C; Mao Z; Li B; Xing P; Wu QL
Microbiol Spectr; 2023 Feb; 11(1):e0332822. PubMed ID: 36475839
[TBL] [Abstract][Full Text] [Related]
7. Diversity, enrichment, and genomic potential of anaerobic methane- and ammonium-oxidizing microorganisms from a brewery wastewater treatment plant.
Stultiens K; van Kessel MAHJ; Frank J; Fischer P; Pelzer C; van Alen TA; Kartal B; Op den Camp HJM; Jetten MSM
Appl Microbiol Biotechnol; 2020 Aug; 104(16):7201-7212. PubMed ID: 32607646
[TBL] [Abstract][Full Text] [Related]
8. Recovery of strain-resolved genomes from human microbiome through an integration framework of single-cell genomics and metagenomics.
Arikawa K; Ide K; Kogawa M; Saeki T; Yoda T; Endoh T; Matsuhashi A; Takeyama H; Hosokawa M
Microbiome; 2021 Oct; 9(1):202. PubMed ID: 34641955
[TBL] [Abstract][Full Text] [Related]
9. Salvaging high-quality genomes of microbial species from a meromictic lake using a hybrid sequencing approach.
Chen YH; Chiang PW; Rogozin DY; Degermendzhy AG; Chiu HH; Tang SL
Commun Biol; 2021 Aug; 4(1):996. PubMed ID: 34426638
[TBL] [Abstract][Full Text] [Related]
10. Metagenomic Analysis of Five Phylogenetically Distant Anammox Bacterial Enrichment Cultures.
Oshiki M; Takaki Y; Hirai M; Nunoura T; Kamigaito A; Okabe S
Microbes Environ; 2022; 37(3):. PubMed ID: 35811137
[TBL] [Abstract][Full Text] [Related]
11. Novel canine high-quality metagenome-assembled genomes, prophages and host-associated plasmids provided by long-read metagenomics together with Hi-C proximity ligation.
Cuscó A; Pérez D; Viñes J; Fàbregas N; Francino O
Microb Genom; 2022 Mar; 8(3):. PubMed ID: 35298370
[TBL] [Abstract][Full Text] [Related]
12. Recovery of metagenome-assembled microbial genomes from a full-scale biogas plant of food waste by pacific biosciences high-fidelity sequencing.
Jiang F; Li Q; Wang S; Shen T; Wang H; Wang A; Xu D; Yuan L; Lei L; Chen R; Yang B; Deng Y; Fan W
Front Microbiol; 2022; 13():1095497. PubMed ID: 36699587
[TBL] [Abstract][Full Text] [Related]
13. A comprehensive investigation of metagenome assembly by linked-read sequencing.
Zhang L; Fang X; Liao H; Zhang Z; Zhou X; Han L; Chen Y; Qiu Q; Li SC
Microbiome; 2020 Nov; 8(1):156. PubMed ID: 33176883
[TBL] [Abstract][Full Text] [Related]
14. Nanopore long-read-only metagenomics enables complete and high-quality genome reconstruction from mock and complex metagenomes.
Liu L; Yang Y; Deng Y; Zhang T
Microbiome; 2022 Dec; 10(1):209. PubMed ID: 36457010
[TBL] [Abstract][Full Text] [Related]
15. Metagenome-assembled genome binning methods with short reads disproportionately fail for plasmids and genomic Islands.
Maguire F; Jia B; Gray KL; Lau WYV; Beiko RG; Brinkman FSL
Microb Genom; 2020 Oct; 6(10):. PubMed ID: 33001022
[TBL] [Abstract][Full Text] [Related]
16. MAGNETO: An Automated Workflow for Genome-Resolved Metagenomics.
Churcheward B; Millet M; Bihouée A; Fertin G; Chaffron S
mSystems; 2022 Aug; 7(4):e0043222. PubMed ID: 35703559
[TBL] [Abstract][Full Text] [Related]
17. The Reliability of Metagenome-Assembled Genomes (MAGs) in Representing Natural Populations: Insights from Comparing MAGs against Isolate Genomes Derived from the Same Fecal Sample.
Meziti A; Rodriguez-R LM; Hatt JK; Peña-Gonzalez A; Levy K; Konstantinidis KT
Appl Environ Microbiol; 2021 Feb; 87(6):. PubMed ID: 33452027
[TBL] [Abstract][Full Text] [Related]
18. Long-read based de novo assembly of low-complexity metagenome samples results in finished genomes and reveals insights into strain diversity and an active phage system.
Somerville V; Lutz S; Schmid M; Frei D; Moser A; Irmler S; Frey JE; Ahrens CH
BMC Microbiol; 2019 Jun; 19(1):143. PubMed ID: 31238873
[TBL] [Abstract][Full Text] [Related]
19. New insights into functional divergence and adaptive evolution of uncultured bacteria in anammox community by complete genome-centric analysis.
Wang YC; Mao Y; Fu HM; Wang J; Weng X; Liu ZH; Xu XW; Yan P; Fang F; Guo JS; Shen Y; Chen YP
Sci Total Environ; 2024 May; 924():171530. PubMed ID: 38453092
[TBL] [Abstract][Full Text] [Related]
20. Long-Read Metagenome-Assembled Genomes Improve Identification of Novel Complete Biosynthetic Gene Clusters in a Complex Microbial Activated Sludge Ecosystem.
Sánchez-Navarro R; Nuhamunada M; Mohite OS; Wasmund K; Albertsen M; Gram L; Nielsen PH; Weber T; Singleton CM
mSystems; 2022 Dec; 7(6):e0063222. PubMed ID: 36445112
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]