These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

196 related articles for article (PubMed ID: 33163148)

  • 1. HMST-Seq-Analyzer: A new python tool for differential methylation and hydroxymethylation analysis in various DNA methylation sequencing data.
    Farooq A; Grønmyr S; Ali O; Rognes T; Scheffler K; Bjørås M; Wang J
    Comput Struct Biotechnol J; 2020; 18():2877-2889. PubMed ID: 33163148
    [TBL] [Abstract][Full Text] [Related]  

  • 2. MethylC-analyzer: a comprehensive downstream pipeline for the analysis of genome-wide DNA methylation.
    Lu RJ; Lin PY; Yen MR; Wu BH; Chen PY
    Bot Stud; 2023 Jan; 64(1):1. PubMed ID: 36607439
    [TBL] [Abstract][Full Text] [Related]  

  • 3. MethGo: a comprehensive tool for analyzing whole-genome bisulfite sequencing data.
    Liao WW; Yen MR; Ju E; Hsu FM; Lam L; Chen PY
    BMC Genomics; 2015; 16 Suppl 12(Suppl 12):S11. PubMed ID: 26680022
    [TBL] [Abstract][Full Text] [Related]  

  • 4. pWGBSSimla: a profile-based whole-genome bisulfite sequencing data simulator incorporating methylation QTLs, allele-specific methylations and differentially methylated regions.
    Chung RH; Kang CY
    Bioinformatics; 2020 Feb; 36(3):660-665. PubMed ID: 31397839
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Unidirectional alteration of methylation and hydroxymethylation at the promoters and differential gene expression in oral squamous cell carcinoma.
    Zhao W; Zhu L; Gong Q; Ma S; Xiong H; Su T; Wan Z; Wang D
    Front Genet; 2023; 14():1269084. PubMed ID: 37900177
    [No Abstract]   [Full Text] [Related]  

  • 6. Whole-Genome Bisulfite Sequencing for the Analysis of Genome-Wide DNA Methylation and Hydroxymethylation Patterns at Single-Nucleotide Resolution.
    Kernaleguen M; Daviaud C; Shen Y; Bonnet E; Renault V; Deleuze JF; Mauger F; Tost J
    Methods Mol Biol; 2018; 1767():311-349. PubMed ID: 29524144
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DNA Methylation Analysis.
    Feng L; Lou J
    Methods Mol Biol; 2019; 1894():181-227. PubMed ID: 30547463
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genome-Wide DNA Methylation and Hydroxymethylation Changes Revealed Epigenetic Regulation of Neuromodulation and Myelination in Yak Hypothalamus.
    Chai Z; Wu Z; Ji Q; Wang J; Wang J; Wang H; Zhang C; Zhong J; Xin J
    Front Genet; 2021; 12():592135. PubMed ID: 34646294
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Epigenetic modifier alpha-ketoglutarate modulates aberrant gene body methylation and hydroxymethylation marks in diabetic heart.
    Dhat R; Mongad D; Raji S; Arkat S; Mahapatra NR; Singhal N; Sitasawad SL
    Epigenetics Chromatin; 2023 Apr; 16(1):12. PubMed ID: 37101286
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Integrative multi-omics analysis depicts the methylome and hydroxymethylome in recurrent bladder cancers and identifies biomarkers for predicting PD-L1 expression.
    Shi ZD; Han XX; Song ZJ; Dong Y; Pang K; Wang XL; Liu XY; Lu H; Xu GZ; Hao L; Dong BZ; Liang Q; Wu XK; Han CH
    Biomark Res; 2023 May; 11(1):47. PubMed ID: 37138354
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Parallel profiling of DNA methylation and hydroxymethylation highlights neuropathology-associated epigenetic variation in Alzheimer's disease.
    Smith AR; Smith RG; Pishva E; Hannon E; Roubroeks JAY; Burrage J; Troakes C; Al-Sarraj S; Sloan C; Mill J; van den Hove DL; Lunnon K
    Clin Epigenetics; 2019 Mar; 11(1):52. PubMed ID: 30898171
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Efficient and accurate determination of genome-wide DNA methylation patterns in Arabidopsis thaliana with enzymatic methyl sequencing.
    Feng S; Zhong Z; Wang M; Jacobsen SE
    Epigenetics Chromatin; 2020 Oct; 13(1):42. PubMed ID: 33028374
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Bisulfite Sequencing Using Small DNA Amounts.
    Edelmann S; Scholten S
    Methods Mol Biol; 2018; 1675():45-60. PubMed ID: 29052184
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Comprehensive evaluation of genome-wide 5-hydroxymethylcytosine profiling approaches in human DNA.
    Skvortsova K; Zotenko E; Luu PL; Gould CM; Nair SS; Clark SJ; Stirzaker C
    Epigenetics Chromatin; 2017; 10():16. PubMed ID: 28428825
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Combining MeDIP-seq and MRE-seq to investigate genome-wide CpG methylation.
    Li D; Zhang B; Xing X; Wang T
    Methods; 2015 Jan; 72():29-40. PubMed ID: 25448294
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Whole-genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver.
    Li X; Liu Y; Salz T; Hansen KD; Feinberg A
    Genome Res; 2016 Dec; 26(12):1730-1741. PubMed ID: 27737935
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Dynamic heterogeneity of DNA methylation and hydroxymethylation in embryonic stem cell populations captured by single-cell 3D high-content analysis.
    Tajbakhsh J; Stefanovski D; Tang G; Wawrowsky K; Liu N; Fair JH
    Exp Cell Res; 2015 Mar; 332(2):190-201. PubMed ID: 25700729
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Characterization of DNA hydroxymethylation profile in cervical cancer.
    Wang J; Su Y; Tian Y; Ding Y; Wang X
    Artif Cells Nanomed Biotechnol; 2019 Dec; 47(1):2706-2714. PubMed ID: 31271297
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Methylated DNA immunoprecipitation and high-throughput sequencing (MeDIP-seq) using low amounts of genomic DNA.
    Zhao MT; Whyte JJ; Hopkins GM; Kirk MD; Prather RS
    Cell Reprogram; 2014 Jun; 16(3):175-84. PubMed ID: 24773292
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Genome-Wide Mapping of 5mC and 5hmC Identified Differentially Modified Genomic Regions in Late-Onset Severe Preeclampsia: A Pilot Study.
    Zhu L; Lv R; Kong L; Cheng H; Lan F; Li X
    PLoS One; 2015; 10(7):e0134119. PubMed ID: 26214307
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.