BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

400 related articles for article (PubMed ID: 33174605)

  • 1. OMA orthology in 2021: website overhaul, conserved isoforms, ancestral gene order and more.
    Altenhoff AM; Train CM; Gilbert KJ; Mediratta I; Mendes de Farias T; Moi D; Nevers Y; Radoykova HS; Rossier V; Warwick Vesztrocy A; Glover NM; Dessimoz C
    Nucleic Acids Res; 2021 Jan; 49(D1):D373-D379. PubMed ID: 33174605
    [TBL] [Abstract][Full Text] [Related]  

  • 2. OMA orthology in 2024: improved prokaryote coverage, ancestral and extant GO enrichment, a revamped synteny viewer and more in the OMA Ecosystem.
    Altenhoff AM; Warwick Vesztrocy A; Bernard C; Train CM; Nicheperovich A; Prieto Baños S; Julca I; Moi D; Nevers Y; Majidian S; Dessimoz C; Glover NM
    Nucleic Acids Res; 2024 Jan; 52(D1):D513-D521. PubMed ID: 37962356
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The OMA orthology database in 2018: retrieving evolutionary relationships among all domains of life through richer web and programmatic interfaces.
    Altenhoff AM; Glover NM; Train CM; Kaleb K; Warwick Vesztrocy A; Dylus D; de Farias TM; Zile K; Stevenson C; Long J; Redestig H; Gonnet GH; Dessimoz C
    Nucleic Acids Res; 2018 Jan; 46(D1):D477-D485. PubMed ID: 29106550
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The OMA orthology database in 2015: function predictions, better plant support, synteny view and other improvements.
    Altenhoff AM; Škunca N; Glover N; Train CM; Sueki A; Piližota I; Gori K; Tomiczek B; Müller S; Redestig H; Gonnet GH; Dessimoz C
    Nucleic Acids Res; 2015 Jan; 43(Database issue):D240-9. PubMed ID: 25399418
    [TBL] [Abstract][Full Text] [Related]  

  • 5. OMA 2011: orthology inference among 1000 complete genomes.
    Altenhoff AM; Schneider A; Gonnet GH; Dessimoz C
    Nucleic Acids Res; 2011 Jan; 39(Database issue):D289-94. PubMed ID: 21113020
    [TBL] [Abstract][Full Text] [Related]  

  • 6. COVID-19 CG enables SARS-CoV-2 mutation and lineage tracking by locations and dates of interest.
    Chen AT; Altschuler K; Zhan SH; Chan YA; Deverman BE
    Elife; 2021 Feb; 10():. PubMed ID: 33620031
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Orthologous Matrix (OMA) algorithm 2.0: more robust to asymmetric evolutionary rates and more scalable hierarchical orthologous group inference.
    Train CM; Glover NM; Gonnet GH; Altenhoff AM; Dessimoz C
    Bioinformatics; 2017 Jul; 33(14):i75-i82. PubMed ID: 28881964
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Identifying orthologs with OMA: A primer.
    Zahn-Zabal M; Dessimoz C; Glover NM
    F1000Res; 2020; 9():27. PubMed ID: 32089838
    [TBL] [Abstract][Full Text] [Related]  

  • 9. The UCSC Genome Browser database: 2021 update.
    Navarro Gonzalez J; Zweig AS; Speir ML; Schmelter D; Rosenbloom KR; Raney BJ; Powell CC; Nassar LR; Maulding ND; Lee CM; Lee BT; Hinrichs AS; Fyfe AC; Fernandes JD; Diekhans M; Clawson H; Casper J; Benet-Pagès A; Barber GP; Haussler D; Kuhn RM; Haeussler M; Kent WJ
    Nucleic Acids Res; 2021 Jan; 49(D1):D1046-D1057. PubMed ID: 33221922
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The Plant Orthology Browser: An Orthology and Gene-Order Visualizer for Plant Comparative Genomics.
    Tulpan D; Leger S
    Plant Genome; 2017 Mar; 10(1):. PubMed ID: 28464063
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ViruSurf: an integrated database to investigate viral sequences.
    Canakoglu A; Pinoli P; Bernasconi A; Alfonsi T; Melidis DP; Ceri S
    Nucleic Acids Res; 2021 Jan; 49(D1):D817-D824. PubMed ID: 33045721
    [TBL] [Abstract][Full Text] [Related]  

  • 12. DrosOMA: the
    Thiébaut A; Altenhoff AM; Campli G; Glover N; Dessimoz C; Waterhouse RM
    F1000Res; 2023; 12():936. PubMed ID: 38434623
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A phylogenomic gene cluster resource: the Phylogenetically Inferred Groups (PhIGs) database.
    Dehal PS; Boore JL
    BMC Bioinformatics; 2006 Apr; 7():201. PubMed ID: 16608522
    [TBL] [Abstract][Full Text] [Related]  

  • 14. PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium.
    Mi H; Dong Q; Muruganujan A; Gaudet P; Lewis S; Thomas PD
    Nucleic Acids Res; 2010 Jan; 38(Database issue):D204-10. PubMed ID: 20015972
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Mouse Genome Database (MGD): Knowledgebase for mouse-human comparative biology.
    Blake JA; Baldarelli R; Kadin JA; Richardson JE; Smith CL; Bult CJ;
    Nucleic Acids Res; 2021 Jan; 49(D1):D981-D987. PubMed ID: 33231642
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates.
    Dardaillon J; Dauga D; Simion P; Faure E; Onuma TA; DeBiasse MB; Louis A; Nitta KR; Naville M; Besnardeau L; Reeves W; Wang K; Fagotto M; Guéroult-Bellone M; Fujiwara S; Dumollard R; Veeman M; Volff JN; Roest Crollius H; Douzery E; Ryan JF; Davidson B; Nishida H; Dantec C; Lemaire P
    Nucleic Acids Res; 2020 Jan; 48(D1):D668-D675. PubMed ID: 31680137
    [TBL] [Abstract][Full Text] [Related]  

  • 17. LitCovid: an open database of COVID-19 literature.
    Chen Q; Allot A; Lu Z
    Nucleic Acids Res; 2021 Jan; 49(D1):D1534-D1540. PubMed ID: 33166392
    [TBL] [Abstract][Full Text] [Related]  

  • 18. The evolution of protostome GATA factors: molecular phylogenetics, synteny, and intron/exon structure reveal orthologous relationships.
    Gillis WQ; Bowerman BA; Schneider SQ
    BMC Evol Biol; 2008 Apr; 8():112. PubMed ID: 18412965
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genomic characterization and phylogenetic evolution of the SARS-CoV-2.
    Zhang RH; Ai X; Liu Y; Li CH; Zhang HL
    Acta Virol; 2020; 64(4):496-500. PubMed ID: 32985209
    [TBL] [Abstract][Full Text] [Related]  

  • 20. SynteBase/SynteView: a tool to visualize gene order conservation in prokaryotic genomes.
    Lemoine F; Labedan B; Lespinet O
    BMC Bioinformatics; 2008 Dec; 9():536. PubMed ID: 19087285
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 20.