145 related articles for article (PubMed ID: 33203352)
1. Alignment of biological networks by integer linear programming: virus-host protein-protein interaction networks.
Llabrés M; Riera G; Rosselló F; Valiente G
BMC Bioinformatics; 2020 Nov; 21(Suppl 6):434. PubMed ID: 33203352
[TBL] [Abstract][Full Text] [Related]
2. Alignment of virus-host protein-protein interaction networks by integer linear programming: SARS-CoV-2.
Llabrés M; Valiente G
PLoS One; 2020; 15(12):e0236304. PubMed ID: 33284827
[TBL] [Abstract][Full Text] [Related]
3. Alignment of protein interaction networks by integer quadratic programming.
Li Z; Wang Y; Zhang S; Zhang XS; Chen L
Conf Proc IEEE Eng Med Biol Soc; 2006; 2006():5527-30. PubMed ID: 17945906
[TBL] [Abstract][Full Text] [Related]
4. Reduced-Size Integer Linear Programming Models for String Selection Problems: Application to the Farthest String Problem.
Zörnig P
J Comput Biol; 2015 Aug; 22(8):729-42. PubMed ID: 25525691
[TBL] [Abstract][Full Text] [Related]
5. Clumppling: cluster matching and permutation program with integer linear programming.
Liu X; Kopelman NM; Rosenberg NA
Bioinformatics; 2024 Jan; 40(1):. PubMed ID: 38096585
[TBL] [Abstract][Full Text] [Related]
6. Alignment of molecular networks by integer quadratic programming.
Zhenping L; Zhang S; Wang Y; Zhang XS; Chen L
Bioinformatics; 2007 Jul; 23(13):1631-9. PubMed ID: 17468121
[TBL] [Abstract][Full Text] [Related]
7. Sequential computation of elementary modes and minimal cut sets in genome-scale metabolic networks using alternate integer linear programming.
Song HS; Goldberg N; Mahajan A; Ramkrishna D
Bioinformatics; 2017 Aug; 33(15):2345-2353. PubMed ID: 28369193
[TBL] [Abstract][Full Text] [Related]
8. Learning feedback molecular network models using integer linear programming.
Ozen M; Emamian ES; Abdi A
Phys Biol; 2022 Oct; 19(6):. PubMed ID: 36103868
[TBL] [Abstract][Full Text] [Related]
9. Chromosome structures: reduction of certain problems with unequal gene content and gene paralogs to integer linear programming.
Lyubetsky V; Gershgorin R; Gorbunov K
BMC Bioinformatics; 2017 Dec; 18(1):537. PubMed ID: 29212445
[TBL] [Abstract][Full Text] [Related]
10. Discovery of Boolean metabolic networks: integer linear programming based approach.
Qiu Y; Jiang H; Ching WK; Cheng X
BMC Syst Biol; 2018 Apr; 12(Suppl 1):7. PubMed ID: 29671395
[TBL] [Abstract][Full Text] [Related]
11. A generalized threading model using integer programming that allows for secondary structure element deletion.
Ellrott K; Guo JT; Olman V; Xu Y
Genome Inform; 2006; 17(2):248-58. PubMed ID: 17503397
[TBL] [Abstract][Full Text] [Related]
12. RAPTOR: optimal protein threading by linear programming.
Xu J; Li M; Kim D; Xu Y
J Bioinform Comput Biol; 2003 Apr; 1(1):95-117. PubMed ID: 15290783
[TBL] [Abstract][Full Text] [Related]
13. Seriation of asymmetric matrices using integer linear programming.
Brusco MJ
Br J Math Stat Psychol; 2001 Nov; 54(Pt 2):367-75. PubMed ID: 11817100
[TBL] [Abstract][Full Text] [Related]
14. A Scheme to Optimize Flow Routing and Polling Switch Selection of Software Defined Networks.
Chen H; Li L; Ren J; Wang Y; Zhao Y; Wang X; Wang S; Xu S
PLoS One; 2015; 10(12):e0145437. PubMed ID: 26690571
[TBL] [Abstract][Full Text] [Related]
15. Efficient Minimum Flow Decomposition via Integer Linear Programming.
Dias FHC; Williams L; Mumey B; Tomescu AI
J Comput Biol; 2022 Nov; 29(11):1252-1267. PubMed ID: 36260412
[TBL] [Abstract][Full Text] [Related]
16. Protein threading by linear programming.
Xu J; Li M; Lin G; Kim D; Xu Y
Pac Symp Biocomput; 2003; ():264-75. PubMed ID: 12603034
[TBL] [Abstract][Full Text] [Related]
17. Solving and analyzing side-chain positioning problems using linear and integer programming.
Kingsford CL; Chazelle B; Singh M
Bioinformatics; 2005 Apr; 21(7):1028-36. PubMed ID: 15546935
[TBL] [Abstract][Full Text] [Related]
18. A mixed integer linear programming model for long-term planning of municipal solid waste management systems: Against restricted mass balances.
Batur ME; Cihan A; Korucu MK; Bektaş N; Keskinler B
Waste Manag; 2020 Mar; 105():211-222. PubMed ID: 32087539
[TBL] [Abstract][Full Text] [Related]
19. L-GRAAL: Lagrangian graphlet-based network aligner.
Malod-Dognin N; Pržulj N
Bioinformatics; 2015 Jul; 31(13):2182-9. PubMed ID: 25725498
[TBL] [Abstract][Full Text] [Related]
20. Solving linear integer programming problems by a novel neural model.
Cavalieri S
Int J Neural Syst; 1999 Feb; 9(1):27-39. PubMed ID: 10401928
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
