148 related articles for article (PubMed ID: 33211663)
1. A Robust Algorithm Based on Link Label Propagation for Identifying Functional Modules From Protein-Protein Interaction Networks.
Jiang H; Zhan F; Wang C; Qiu J; Su Y; Zheng C; Zhang X; Zeng X
IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(3):1435-1448. PubMed ID: 33211663
[TBL] [Abstract][Full Text] [Related]
2. Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data.
Li M; Wu X; Wang J; Pan Y
BMC Bioinformatics; 2012 May; 13():109. PubMed ID: 22621308
[TBL] [Abstract][Full Text] [Related]
3. Functional module identification in protein interaction networks by interaction patterns.
Wang Y; Qian X
Bioinformatics; 2014 Jan; 30(1):81-93. PubMed ID: 24085567
[TBL] [Abstract][Full Text] [Related]
4. C-element: a new clustering algorithm to find high quality functional modules in PPI networks.
Ghasemi M; Rahgozar M; Bidkhori G; Masoudi-Nejad A
PLoS One; 2013; 8(9):e72366. PubMed ID: 24039752
[TBL] [Abstract][Full Text] [Related]
5. Identification of hierarchical and overlapping functional modules in PPI networks.
Wang J; Ren J; Li M; Wu FX
IEEE Trans Nanobioscience; 2012 Dec; 11(4):386-93. PubMed ID: 22955967
[TBL] [Abstract][Full Text] [Related]
6. AdaPPI: identification of novel protein functional modules via adaptive graph convolution networks in a protein-protein interaction network.
Chen H; Cai Y; Ji C; Selvaraj G; Wei D; Wu H
Brief Bioinform; 2023 Jan; 24(1):. PubMed ID: 36526282
[TBL] [Abstract][Full Text] [Related]
7. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
Maskey S; Cho YR
BMC Genomics; 2019 Dec; 20(Suppl 9):964. PubMed ID: 31874635
[TBL] [Abstract][Full Text] [Related]
8. Identification of protein complexes and functional modules in E. coli PPI networks.
Kong P; Huang G; Liu W
BMC Microbiol; 2020 Aug; 20(1):243. PubMed ID: 32762711
[TBL] [Abstract][Full Text] [Related]
9. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
Ou-Yang L; Yan H; Zhang XF
BMC Bioinformatics; 2017 Dec; 18(Suppl 13):463. PubMed ID: 29219066
[TBL] [Abstract][Full Text] [Related]
10. A hybrid clustering algorithm for identifying modules in Protein-Protein Interaction networks.
Yu L; Gao L; Sun PG
Int J Data Min Bioinform; 2010; 4(5):600-15. PubMed ID: 21133044
[TBL] [Abstract][Full Text] [Related]
11. Detecting Functional Modules Based on a Multiple-Grain Model in Large-Scale Protein-Protein Interaction Networks.
Ji J; Lv J; Yang C; Zhang A
IEEE/ACM Trans Comput Biol Bioinform; 2016; 13(4):610-22. PubMed ID: 26394434
[TBL] [Abstract][Full Text] [Related]
12. SNFM: A semi-supervised NMF algorithm for detecting biological functional modules.
Man YT; Liu GM; Yang K; Zhou XZ
Math Biosci Eng; 2019 Mar; 16(4):1933-1948. PubMed ID: 31137193
[TBL] [Abstract][Full Text] [Related]
13. Clustering algorithms for detecting functional modules in protein interaction networks.
Gao L; Sun PG; Song J
J Bioinform Comput Biol; 2009 Feb; 7(1):217-42. PubMed ID: 19226668
[TBL] [Abstract][Full Text] [Related]
14. Efficient and accurate Greedy Search Methods for mining functional modules in protein interaction networks.
He J; Li C; Ye B; Zhong W
BMC Bioinformatics; 2012 Jun; 13 Suppl 10(Suppl 10):S19. PubMed ID: 22759424
[TBL] [Abstract][Full Text] [Related]
15. Identifying functional modules in interaction networks through overlapping Markov clustering.
Shih YK; Parthasarathy S
Bioinformatics; 2012 Sep; 28(18):i473-i479. PubMed ID: 22962469
[TBL] [Abstract][Full Text] [Related]
16. Identifying protein complexes and functional modules--from static PPI networks to dynamic PPI networks.
Chen B; Fan W; Liu J; Wu FX
Brief Bioinform; 2014 Mar; 15(2):177-94. PubMed ID: 23780996
[TBL] [Abstract][Full Text] [Related]
17. From communities to protein complexes: A local community detection algorithm on PPI networks.
Dilmaghani S; Brust MR; Ribeiro CHC; Kieffer E; Danoy G; Bouvry P
PLoS One; 2022; 17(1):e0260484. PubMed ID: 35085263
[TBL] [Abstract][Full Text] [Related]
18. A novel subgradient-based optimization algorithm for blockmodel functional module identification.
Wang Y; Qian X
BMC Bioinformatics; 2013; 14 Suppl 2(Suppl 2):S23. PubMed ID: 23368964
[TBL] [Abstract][Full Text] [Related]
19. A Network Hierarchy-Based method for functional module detection in protein-protein interaction networks.
Liu W; Ma L; Jeon B; Chen L; Chen B
J Theor Biol; 2018 Oct; 455():26-38. PubMed ID: 29981337
[TBL] [Abstract][Full Text] [Related]
20. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
Yu L; Gao L; Li K; Zhao Y; Chiu DK
Comput Biol Chem; 2011 Oct; 35(5):298-307. PubMed ID: 22000801
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
