BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

402 related articles for article (PubMed ID: 33216750)

  • 1. Rare genetic variation at transcription factor binding sites modulates local DNA methylation profiles.
    Martin-Trujillo A; Patel N; Richter F; Jadhav B; Garg P; Morton SU; McKean DM; DePalma SR; Goldmuntz E; Gruber D; Kim R; Newburger JW; Porter GA; Giardini A; Bernstein D; Tristani-Firouzi M; Seidman JG; Seidman CE; Chung WK; Gelb BD; Sharp AJ
    PLoS Genet; 2020 Nov; 16(11):e1009189. PubMed ID: 33216750
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Genome-wide conserved consensus transcription factor binding motifs are hyper-methylated.
    Choy MK; Movassagh M; Goh HG; Bennett MR; Down TA; Foo RS
    BMC Genomics; 2010 Sep; 11():519. PubMed ID: 20875111
    [TBL] [Abstract][Full Text] [Related]  

  • 3. MethMotif: an integrative cell specific database of transcription factor binding motifs coupled with DNA methylation profiles.
    Xuan Lin QX; Sian S; An O; Thieffry D; Jha S; Benoukraf T
    Nucleic Acids Res; 2019 Jan; 47(D1):D145-D154. PubMed ID: 30380113
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Impacts of Chromatin States and Long-Range Genomic Segments on Aging and DNA Methylation.
    Sun D; Yi SV
    PLoS One; 2015; 10(6):e0128517. PubMed ID: 26091484
    [TBL] [Abstract][Full Text] [Related]  

  • 5. All and only CpG containing sequences are enriched in promoters abundantly bound by RNA polymerase II in multiple tissues.
    Rozenberg JM; Shlyakhtenko A; Glass K; Rishi V; Myakishev MV; FitzGerald PC; Vinson C
    BMC Genomics; 2008 Feb; 9():67. PubMed ID: 18252004
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Charting a dynamic DNA methylation landscape of the human genome.
    Ziller MJ; Gu H; Müller F; Donaghey J; Tsai LT; Kohlbacher O; De Jager PL; Rosen ED; Bennett DA; Bernstein BE; Gnirke A; Meissner A
    Nature; 2013 Aug; 500(7463):477-81. PubMed ID: 23925113
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Obligatory and facilitative allelic variation in the DNA methylome within common disease-associated loci.
    Bell CG; Gao F; Yuan W; Roos L; Acton RJ; Xia Y; Bell J; Ward K; Mangino M; Hysi PG; Wang J; Spector TD
    Nat Commun; 2018 Jan; 9(1):8. PubMed ID: 29295990
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Human monocyte-to-macrophage differentiation involves highly localized gain and loss of DNA methylation at transcription factor binding sites.
    Dekkers KF; Neele AE; Jukema JW; Heijmans BT; de Winther MPJ
    Epigenetics Chromatin; 2019 Jun; 12(1):34. PubMed ID: 31171035
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Effects of cytosine methylation on transcription factor binding sites.
    Medvedeva YA; Khamis AM; Kulakovskiy IV; Ba-Alawi W; Bhuyan MS; Kawaji H; Lassmann T; Harbers M; Forrest AR; Bajic VB;
    BMC Genomics; 2014 Mar; 15():119. PubMed ID: 24669864
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The DNA methylome of human sperm is distinct from blood with little evidence for tissue-consistent obesity associations.
    Åsenius F; Gorrie-Stone TJ; Brew A; Panchbhaya Y; Williamson E; Schalkwyk LC; Rakyan VK; Holland ML; Marzi SJ; Williams DJ
    PLoS Genet; 2020 Oct; 16(10):e1009035. PubMed ID: 33048947
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Genome-wide DNA methylation profiles in hematopoietic stem and progenitor cells reveal overrepresentation of ETS transcription factor binding sites.
    Hogart A; Lichtenberg J; Ajay SS; Anderson S; ; Margulies EH; Bodine DM
    Genome Res; 2012 Aug; 22(8):1407-18. PubMed ID: 22684279
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The patterns of histone modifications in the vicinity of transcription factor binding sites in human lymphoblastoid cell lines.
    Nie Y; Liu H; Sun X
    PLoS One; 2013; 8(3):e60002. PubMed ID: 23527292
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Walking pathways with positive feedback loops reveal DNA methylation biomarkers of colorectal cancer.
    Kel A; Boyarskikh U; Stegmaier P; Leskov LS; Sokolov AV; Yevshin I; Mandrik N; Stelmashenko D; Koschmann J; Kel-Margoulis O; Krull M; Martínez-Cardús A; Moran S; Esteller M; Kolpakov F; Filipenko M; Wingender E
    BMC Bioinformatics; 2019 Apr; 20(Suppl 4):119. PubMed ID: 30999858
    [TBL] [Abstract][Full Text] [Related]  

  • 14. CpG traffic lights are markers of regulatory regions in human genome.
    Lioznova AV; Khamis AM; Artemov AV; Besedina E; Ramensky V; Bajic VB; Kulakovskiy IV; Medvedeva YA
    BMC Genomics; 2019 Feb; 20(1):102. PubMed ID: 30709331
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Epigenetic and genetic alterations and their influence on gene regulation in chronic lymphocytic leukemia.
    Huang D; Ovcharenko I
    BMC Genomics; 2017 Mar; 18(1):236. PubMed ID: 28302063
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Improving analysis of transcription factor binding sites within ChIP-Seq data based on topological motif enrichment.
    Worsley Hunt R; Mathelier A; Del Peso L; Wasserman WW
    BMC Genomics; 2014 Jun; 15(1):472. PubMed ID: 24927817
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Identification of bovine CpG SNPs as potential targets for epigenetic regulation via DNA methylation.
    Maldonado MBC; de Rezende Neto NB; Nagamatsu ST; Carazzolle MF; Hoff JL; Whitacre LK; Schnabel RD; Behura SK; McKay SD; Taylor JF; Lopes FL
    PLoS One; 2019; 14(9):e0222329. PubMed ID: 31513639
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels.
    Banovich NE; Lan X; McVicker G; van de Geijn B; Degner JF; Blischak JD; Roux J; Pritchard JK; Gilad Y
    PLoS Genet; 2014 Sep; 10(9):e1004663. PubMed ID: 25233095
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Mendelian inheritance of trimodal CpG methylation sites suggests distal cis-acting genetic effects.
    Zaghlool SB; Al-Shafai M; Al Muftah WA; Kumar P; Gieger C; Waldenberger M; Falchi M; Suhre K
    Clin Epigenetics; 2016; 8():124. PubMed ID: 27895808
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Characterization of genome-methylome interactions in 22 nuclear pedigrees.
    Plongthongkum N; van Eijk KR; de Jong S; Wang T; Sul JH; Boks MP; Kahn RS; Fung HL; Ophoff RA; Zhang K
    PLoS One; 2014; 9(7):e99313. PubMed ID: 25019935
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 21.