BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

171 related articles for article (PubMed ID: 33224481)

  • 1. Automated cell tracking using StarDist and TrackMate.
    Fazeli E; Roy NH; Follain G; Laine RF; von Chamier L; Hänninen PE; Eriksson JE; Tinevez JY; Jacquemet G
    F1000Res; 2020; 9():1279. PubMed ID: 33224481
    [TBL] [Abstract][Full Text] [Related]  

  • 2. TrackMate: An open and extensible platform for single-particle tracking.
    Tinevez JY; Perry N; Schindelin J; Hoopes GM; Reynolds GD; Laplantine E; Bednarek SY; Shorte SL; Eliceiri KW
    Methods; 2017 Feb; 115():80-90. PubMed ID: 27713081
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Automated tracking of cell migration in phase contrast images with CellTraxx.
    Holme B; Bjørnerud B; Pedersen NM; de la Ballina LR; Wesche J; Haugsten EM
    Sci Rep; 2023 Dec; 13(1):22982. PubMed ID: 38151514
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Automated cell tracking and analysis in phase-contrast videos (iTrack4U): development of Java software based on combined mean-shift processes.
    Cordelières FP; Petit V; Kumasaka M; Debeir O; Letort V; Gallagher SJ; Larue L
    PLoS One; 2013; 8(11):e81266. PubMed ID: 24312283
    [TBL] [Abstract][Full Text] [Related]  

  • 5. TrackMate 7: integrating state-of-the-art segmentation algorithms into tracking pipelines.
    Ershov D; Phan MS; Pylvänäinen JW; Rigaud SU; Le Blanc L; Charles-Orszag A; Conway JRW; Laine RF; Roy NH; Bonazzi D; Duménil G; Jacquemet G; Tinevez JY
    Nat Methods; 2022 Jul; 19(7):829-832. PubMed ID: 35654950
    [TBL] [Abstract][Full Text] [Related]  

  • 6. 2D + Time Object Tracking Using Fiji and ilastik.
    Urru A; González Ballester MA; Zhang C
    Methods Mol Biol; 2019; 2040():423-448. PubMed ID: 31432491
    [TBL] [Abstract][Full Text] [Related]  

  • 7. 3DeeCellTracker, a deep learning-based pipeline for segmenting and tracking cells in 3D time lapse images.
    Wen C; Miura T; Voleti V; Yamaguchi K; Tsutsumi M; Yamamoto K; Otomo K; Fujie Y; Teramoto T; Ishihara T; Aoki K; Nemoto T; Hillman EM; Kimura KD
    Elife; 2021 Mar; 10():. PubMed ID: 33781383
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Multi-feature-Based Robust Cell Tracking.
    Jun BH; Ahmadzadegan A; Ardekani AM; Solorio L; Vlachos PP
    Ann Biomed Eng; 2023 Mar; 51(3):604-617. PubMed ID: 36103061
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Democratising deep learning for microscopy with ZeroCostDL4Mic.
    von Chamier L; Laine RF; Jukkala J; Spahn C; Krentzel D; Nehme E; Lerche M; Hernández-Pérez S; Mattila PK; Karinou E; Holden S; Solak AC; Krull A; Buchholz TO; Jones ML; Royer LA; Leterrier C; Shechtman Y; Jug F; Heilemann M; Jacquemet G; Henriques R
    Nat Commun; 2021 Apr; 12(1):2276. PubMed ID: 33859193
    [TBL] [Abstract][Full Text] [Related]  

  • 10. LIM Tracker: a software package for cell tracking and analysis with advanced interactivity.
    Aragaki H; Ogoh K; Kondo Y; Aoki K
    Sci Rep; 2022 Feb; 12(1):2702. PubMed ID: 35177675
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Automated Tracking of Cell Migration with Rapid Data Analysis.
    DuChez BJ
    Curr Protoc Cell Biol; 2017 Sep; 76():12.12.1-12.12.16. PubMed ID: 28862338
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Traxtile: Interactive editing of cell tracks in time-lapse images.
    Braun BS
    Biotechniques; 2015 Aug; 59(2):82-6. PubMed ID: 26260086
    [TBL] [Abstract][Full Text] [Related]  

  • 13. ImageJ and CellProfiler: Complements in Open-Source Bioimage Analysis.
    Dobson ETA; Cimini B; Klemm AH; Wählby C; Carpenter AE; Eliceiri KW
    Curr Protoc; 2021 May; 1(5):e89. PubMed ID: 34038030
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Rapid sperm capture: high-throughput flagellar waveform analysis.
    Gallagher MT; Cupples G; Ooi EH; Kirkman-Brown JC; Smith DJ
    Hum Reprod; 2019 Jul; 34(7):1173-1185. PubMed ID: 31170729
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Live Plant Cell Tracking: Fiji plugin to analyze cell proliferation dynamics and understand morphogenesis.
    Hernández-Herrera P; Ugartechea-Chirino Y; Torres-Martínez HH; Arzola AV; Chairez-Veloz JE; García-Ponce B; Sánchez MP; Garay-Arroyo A; Álvarez-Buylla ER; Dubrovsky JG; Corkidi G
    Plant Physiol; 2022 Feb; 188(2):846-860. PubMed ID: 34791452
    [TBL] [Abstract][Full Text] [Related]  

  • 16. An analytical tool that quantifies cellular morphology changes from three-dimensional fluorescence images.
    Haass-Koffler CL; Naeemuddin M; Bartlett SE
    J Vis Exp; 2012 Aug; (66):e4233. PubMed ID: 22951512
    [TBL] [Abstract][Full Text] [Related]  

  • 17. MATtrack: A MATLAB-Based Quantitative Image Analysis Platform for Investigating Real-Time Photo-Converted Fluorescent Signals in Live Cells.
    Courtney J; Woods E; Scholz D; Hall WW; Gautier VW
    PLoS One; 2015; 10(10):e0140209. PubMed ID: 26485569
    [TBL] [Abstract][Full Text] [Related]  

  • 18. DetecDiv, a generalist deep-learning platform for automated cell division tracking and survival analysis.
    Aspert T; Hentsch D; Charvin G
    Elife; 2022 Aug; 11():. PubMed ID: 35976090
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Segmentation, tracking and cell cycle analysis of live-cell imaging data with Cell-ACDC.
    Padovani F; Mairhörmann B; Falter-Braun P; Lengefeld J; Schmoller KM
    BMC Biol; 2022 Aug; 20(1):174. PubMed ID: 35932043
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A fully-automated, robust, and versatile algorithm for long-term budding yeast segmentation and tracking.
    Wood NE; Doncic A
    PLoS One; 2019; 14(3):e0206395. PubMed ID: 30917124
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.