206 related articles for article (PubMed ID: 33230331)
1. Mapping replication timing domains genome wide in single mammalian cells with single-cell DNA replication sequencing.
Miura H; Takahashi S; Shibata T; Nagao K; Obuse C; Okumura K; Ogata M; Hiratani I; Takebayashi SI
Nat Protoc; 2020 Dec; 15(12):4058-4100. PubMed ID: 33230331
[TBL] [Abstract][Full Text] [Related]
2. scRepli-Seq: A Powerful Tool to Study Replication Timing and Genome Instability.
Sakamoto M; Hori S; Yamamoto A; Yoneda T; Kuriya K; Takebayashi SI
Cytogenet Genome Res; 2022; 162(4):161-170. PubMed ID: 36455525
[TBL] [Abstract][Full Text] [Related]
3. Genome-wide stability of the DNA replication program in single mammalian cells.
Takahashi S; Miura H; Shibata T; Nagao K; Okumura K; Ogata M; Obuse C; Takebayashi SI; Hiratani I
Nat Genet; 2019 Mar; 51(3):529-540. PubMed ID: 30804559
[TBL] [Abstract][Full Text] [Related]
4. Mapping Replication Timing in Single Mammalian Cells.
Bartlett DA; Dileep V; Baslan T; Gilbert DM
Curr Protoc; 2022 Jan; 2(1):e334. PubMed ID: 34986273
[TBL] [Abstract][Full Text] [Related]
5. Genome-wide copy number profiling of single cells in S-phase reveals DNA-replication domains.
Van der Aa N; Cheng J; Mateiu L; Zamani Esteki M; Kumar P; Dimitriadou E; Vanneste E; Moreau Y; Vermeesch JR; Voet T
Nucleic Acids Res; 2013 Apr; 41(6):e66. PubMed ID: 23295674
[TBL] [Abstract][Full Text] [Related]
6. Genome-wide analysis of replication timing by next-generation sequencing with E/L Repli-seq.
Marchal C; Sasaki T; Vera D; Wilson K; Sima J; Rivera-Mulia JC; Trevilla-García C; Nogues C; Nafie E; Gilbert DM
Nat Protoc; 2018 May; 13(5):819-839. PubMed ID: 29599440
[TBL] [Abstract][Full Text] [Related]
7. Genome-scale analysis of replication timing: from bench to bioinformatics.
Ryba T; Battaglia D; Pope BD; Hiratani I; Gilbert DM
Nat Protoc; 2011 Jun; 6(6):870-95. PubMed ID: 21637205
[TBL] [Abstract][Full Text] [Related]
8. Genome-wide identification and characterisation of human DNA replication origins by initiation site sequencing (ini-seq).
Langley AR; Gräf S; Smith JC; Krude T
Nucleic Acids Res; 2016 Dec; 44(21):10230-10247. PubMed ID: 27587586
[TBL] [Abstract][Full Text] [Related]
9. DNA Replication Timing Enters the Single-Cell Era.
Hiratani I; Takahashi S
Genes (Basel); 2019 Mar; 10(3):. PubMed ID: 30884743
[TBL] [Abstract][Full Text] [Related]
10. Single-cell template strand sequencing by Strand-seq enables the characterization of individual homologs.
Sanders AD; Falconer E; Hills M; Spierings DCJ; Lansdorp PM
Nat Protoc; 2017 Jun; 12(6):1151-1176. PubMed ID: 28492527
[TBL] [Abstract][Full Text] [Related]
11. Protocol to isolate cells in four stages of S phase for high-resolution replication-timing sequencing.
Whetstine JR; Van Rechem C
STAR Protoc; 2022 Mar; 3(1):101209. PubMed ID: 35243385
[TBL] [Abstract][Full Text] [Related]
12. Genomic methods for measuring DNA replication dynamics.
Hulke ML; Massey DJ; Koren A
Chromosome Res; 2020 Mar; 28(1):49-67. PubMed ID: 31848781
[TBL] [Abstract][Full Text] [Related]
13. The Performance of Whole Genome Amplification Methods and Next-Generation Sequencing for Pre-Implantation Genetic Diagnosis of Chromosomal Abnormalities.
Li N; Wang L; Wang H; Ma M; Wang X; Li Y; Zhang W; Zhang J; Cram DS; Yao Y
J Genet Genomics; 2015 Apr; 42(4):151-9. PubMed ID: 25953353
[TBL] [Abstract][Full Text] [Related]
14. Single-cell whole-genome analyses by Linear Amplification via Transposon Insertion (LIANTI).
Chen C; Xing D; Tan L; Li H; Zhou G; Huang L; Xie XS
Science; 2017 Apr; 356(6334):189-194. PubMed ID: 28408603
[TBL] [Abstract][Full Text] [Related]
15. Separation and parallel sequencing of the genomes and transcriptomes of single cells using G&T-seq.
Macaulay IC; Teng MJ; Haerty W; Kumar P; Ponting CP; Voet T
Nat Protoc; 2016 Nov; 11(11):2081-103. PubMed ID: 27685099
[TBL] [Abstract][Full Text] [Related]
16. SCOPE: A Normalization and Copy-Number Estimation Method for Single-Cell DNA Sequencing.
Wang R; Lin DY; Jiang Y
Cell Syst; 2020 May; 10(5):445-452.e6. PubMed ID: 32437686
[TBL] [Abstract][Full Text] [Related]
17. Combined Genome and Transcriptome (G&T) Sequencing of Single Cells.
Bronner IF; Lorenz S
Methods Mol Biol; 2019; 1979():319-362. PubMed ID: 31028647
[TBL] [Abstract][Full Text] [Related]
18. DNA copy-number measurement of genome replication dynamics by high-throughput sequencing: the sort-seq, sync-seq and MFA-seq family.
Batrakou DG; Müller CA; Wilson RHC; Nieduszynski CA
Nat Protoc; 2020 Mar; 15(3):1255-1284. PubMed ID: 32051615
[TBL] [Abstract][Full Text] [Related]
19. Massively parallel sequencing of micro-manipulated cells targeting a comprehensive panel of disease-causing genes: A comparative evaluation of upstream whole-genome amplification methods.
Deleye L; Gansemans Y; De Coninck D; Van Nieuwerburgh F; Deforce D
PLoS One; 2018; 13(4):e0196334. PubMed ID: 29698522
[TBL] [Abstract][Full Text] [Related]
20. Profiling DNA Methylation Genome-Wide in Single Cells.
Galvão A; Kelsey G
Methods Mol Biol; 2021; 2214():221-240. PubMed ID: 32944913
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
