These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

303 related articles for article (PubMed ID: 33253214)

  • 1. Predicting changes in protein thermodynamic stability upon point mutation with deep 3D convolutional neural networks.
    Li B; Yang YT; Capra JA; Gerstein MB
    PLoS Comput Biol; 2020 Nov; 16(11):e1008291. PubMed ID: 33253214
    [TBL] [Abstract][Full Text] [Related]  

  • 2. PMSPcnn: Predicting protein stability changes upon single point mutations with convolutional neural network.
    Sun X; Yang S; Wu Z; Su J; Hu F; Chang F; Li C
    Structure; 2024 Jun; 32(6):838-848.e3. PubMed ID: 38508191
    [TBL] [Abstract][Full Text] [Related]  

  • 3. OmeDDG: Improved Protein Mutation Stability Prediction Based on Predicted 3D Structures.
    Liu B; Jiang Y; Yang Y; Chen JX
    J Phys Chem B; 2024 Jan; 128(1):67-76. PubMed ID: 38130113
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Best templates outperform homology models in predicting the impact of mutations on protein stability.
    Pak MA; Ivankov DN
    Bioinformatics; 2022 Sep; 38(18):4312-4320. PubMed ID: 35894930
    [TBL] [Abstract][Full Text] [Related]  

  • 5. DeepDDG: Predicting the Stability Change of Protein Point Mutations Using Neural Networks.
    Cao H; Wang J; He L; Qi Y; Zhang JZ
    J Chem Inf Model; 2019 Apr; 59(4):1508-1514. PubMed ID: 30759982
    [TBL] [Abstract][Full Text] [Related]  

  • 6. ProSTAGE: Predicting Effects of Mutations on Protein Stability by Using Protein Embeddings and Graph Convolutional Networks.
    Li G; Yao S; Fan L
    J Chem Inf Model; 2024 Jan; 64(2):340-347. PubMed ID: 38166383
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Challenges in predicting stabilizing variations: An exploration.
    Benevenuta S; Birolo G; Sanavia T; Capriotti E; Fariselli P
    Front Mol Biosci; 2022; 9():1075570. PubMed ID: 36685278
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Toward Compilation of Balanced Protein Stability Data Sets: Flattening the ΔΔ
    Kebabci N; Timucin AC; Timucin E
    J Chem Inf Model; 2022 Mar; 62(5):1345-1355. PubMed ID: 35201762
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Evaluation of multislice inputs to convolutional neural networks for medical image segmentation.
    Vu MH; Grimbergen G; Nyholm T; Löfstedt T
    Med Phys; 2020 Dec; 47(12):6216-6231. PubMed ID: 33169365
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Assessing computational tools for predicting protein stability changes upon missense mutations using a new dataset.
    Zheng F; Liu Y; Yang Y; Wen Y; Li M
    Protein Sci; 2024 Jan; 33(1):e4861. PubMed ID: 38084013
    [TBL] [Abstract][Full Text] [Related]  

  • 11. PSP-GNM: Predicting Protein Stability Changes upon Point Mutations with a Gaussian Network Model.
    Mishra SK
    Int J Mol Sci; 2022 Sep; 23(18):. PubMed ID: 36142614
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Integrating thermodynamic and sequence contexts improves protein-RNA binding prediction.
    Su Y; Luo Y; Zhao X; Liu Y; Peng J
    PLoS Comput Biol; 2019 Sep; 15(9):e1007283. PubMed ID: 31483777
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Three-dimensional Deep Convolutional Neural Networks for Automated Myocardial Scar Quantification in Hypertrophic Cardiomyopathy: A Multicenter Multivendor Study.
    Fahmy AS; Neisius U; Chan RH; Rowin EJ; Manning WJ; Maron MS; Nezafat R
    Radiology; 2020 Jan; 294(1):52-60. PubMed ID: 31714190
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Prediction and interpretation of deleterious coding variants in terms of protein structural stability.
    Ancien F; Pucci F; Godfroid M; Rooman M
    Sci Rep; 2018 Mar; 8(1):4480. PubMed ID: 29540703
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Automated glioma grading on conventional MRI images using deep convolutional neural networks.
    Zhuge Y; Ning H; Mathen P; Cheng JY; Krauze AV; Camphausen K; Miller RW
    Med Phys; 2020 Jul; 47(7):3044-3053. PubMed ID: 32277478
    [TBL] [Abstract][Full Text] [Related]  

  • 16. SCONES: Self-Consistent Neural Network for Protein Stability Prediction Upon Mutation.
    Samaga YBL; Raghunathan S; Priyakumar UD
    J Phys Chem B; 2021 Sep; 125(38):10657-10671. PubMed ID: 34546056
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Transfer learning to leverage larger datasets for improved prediction of protein stability changes.
    Dieckhaus H; Brocidiacono M; Randolph NZ; Kuhlman B
    Proc Natl Acad Sci U S A; 2024 Feb; 121(6):e2314853121. PubMed ID: 38285937
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Predicting the Effect of Amino Acid Single-Point Mutations on Protein Stability-Large-Scale Validation of MD-Based Relative Free Energy Calculations.
    Steinbrecher T; Zhu C; Wang L; Abel R; Negron C; Pearlman D; Feyfant E; Duan J; Sherman W
    J Mol Biol; 2017 Apr; 429(7):948-963. PubMed ID: 27964946
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Understanding structure-guided variant effect predictions using 3D convolutional neural networks.
    Ramakrishnan G; Baakman C; Heijl S; Vroling B; van Horck R; Hiraki J; Xue LC; Huynen MA
    Front Mol Biosci; 2023; 10():1204157. PubMed ID: 37475887
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Documentation of an Imperative To Improve Methods for Predicting Membrane Protein Stability.
    Kroncke BM; Duran AM; Mendenhall JL; Meiler J; Blume JD; Sanders CR
    Biochemistry; 2016 Sep; 55(36):5002-9. PubMed ID: 27564391
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.