181 related articles for article (PubMed ID: 33299548)
1.
Yang Z; Pandey P; Marjoram P; Siegmund KD
F1000Res; 2020; 9():586. PubMed ID: 33299548
[TBL] [Abstract][Full Text] [Related]
2. Mutational Signatures in Cancer (MuSiCa): a web application to implement mutational signatures analysis in cancer samples.
Díaz-Gay M; Vila-Casadesús M; Franch-Expósito S; Hernández-Illán E; Lozano JJ; Castellví-Bel S
BMC Bioinformatics; 2018 Jun; 19(1):224. PubMed ID: 29898651
[TBL] [Abstract][Full Text] [Related]
3. A Simple Model-Based Approach to Inferring and Visualizing Cancer Mutation Signatures.
Shiraishi Y; Tremmel G; Miyano S; Stephens M
PLoS Genet; 2015 Dec; 11(12):e1005657. PubMed ID: 26630308
[TBL] [Abstract][Full Text] [Related]
4. Analysis of Mutational Signatures Using the mutSignatures R Library.
Fantini D; Meeks JJ
Methods Mol Biol; 2023; 2684():45-57. PubMed ID: 37410227
[TBL] [Abstract][Full Text] [Related]
5. The Mutational Signature Comprehensive Analysis Toolkit (musicatk) for the Discovery, Prediction, and Exploration of Mutational Signatures.
Chevalier A; Yang S; Khurshid Z; Sahelijo N; Tong T; Huggins JH; Yajima M; Campbell JD
Cancer Res; 2021 Dec; 81(23):5813-5817. PubMed ID: 34625425
[TBL] [Abstract][Full Text] [Related]
6. Analysis of mutational signatures with yet another package for signature analysis.
Hübschmann D; Jopp-Saile L; Andresen C; Krämer S; Gu Z; Heilig CE; Kreutzfeldt S; Teleanu V; Fröhling S; Eils R; Schlesner M
Genes Chromosomes Cancer; 2021 May; 60(5):314-331. PubMed ID: 33222322
[TBL] [Abstract][Full Text] [Related]
7. mSignatureDB: a database for deciphering mutational signatures in human cancers.
Huang PJ; Chiu LY; Lee CC; Yeh YM; Huang KY; Chiu CH; Tang P
Nucleic Acids Res; 2018 Jan; 46(D1):D964-D970. PubMed ID: 29145625
[TBL] [Abstract][Full Text] [Related]
8. Relating mutational signature exposures to clinical data in cancers via signeR 2.0.
Drummond RD; Defelicibus A; Meyenberg M; Valieris R; Dias-Neto E; Rosales RA; da Silva IT
BMC Bioinformatics; 2023 Nov; 24(1):439. PubMed ID: 37990302
[TBL] [Abstract][Full Text] [Related]
9. CoMutPlotter: a web tool for visual summary of mutations in cancer cohorts.
Huang PJ; Lin HH; Lee CC; Chiu LY; Wu SM; Yeh YM; Tang P; Chiu CH; Lyu PC; Tsai PC
BMC Med Genomics; 2019 Jul; 12(Suppl 5):99. PubMed ID: 31296206
[TBL] [Abstract][Full Text] [Related]
10. Unravelling the instability of mutational signatures extraction
Pancotti C; Rollo C; Birolo G; Benevenuta S; Fariselli P; Sanavia T
Front Genet; 2022; 13():1049501. PubMed ID: 36685831
[TBL] [Abstract][Full Text] [Related]
11. Accuracy of mutational signature software on correlated signatures.
Wu Y; Chua EHZ; Ng AWT; Boot A; Rozen SG
Sci Rep; 2022 Jan; 12(1):390. PubMed ID: 35013428
[TBL] [Abstract][Full Text] [Related]
12. mmsig: a fitting approach to accurately identify somatic mutational signatures in hematological malignancies.
Rustad EH; Nadeu F; Angelopoulos N; Ziccheddu B; Bolli N; Puente XS; Campo E; Landgren O; Maura F
Commun Biol; 2021 Mar; 4(1):424. PubMed ID: 33782531
[TBL] [Abstract][Full Text] [Related]
13. CANCERSIGN: a user-friendly and robust tool for identification and classification of mutational signatures and patterns in cancer genomes.
Bayati M; Rabiee HR; Mehrbod M; Vafaee F; Ebrahimi D; Forrest ARR; Alinejad-Rokny H
Sci Rep; 2020 Jan; 10(1):1286. PubMed ID: 31992766
[TBL] [Abstract][Full Text] [Related]
14. A semiparametric kernel independence test with application to mutational signatures.
Lee D; Zhu B
J Am Stat Assoc; 2021; 116(536):1648-1661. PubMed ID: 35515712
[TBL] [Abstract][Full Text] [Related]
15. MutSignatures: an R package for extraction and analysis of cancer mutational signatures.
Fantini D; Vidimar V; Yu Y; Condello S; Meeks JJ
Sci Rep; 2020 Oct; 10(1):18217. PubMed ID: 33106540
[TBL] [Abstract][Full Text] [Related]
16. MutVis: Automated framework for analysis and visualization of mutational signatures in pathogenic bacterial strains.
Prasanna A; Niranjan V
Infect Genet Evol; 2021 Jul; 91():104805. PubMed ID: 33689914
[TBL] [Abstract][Full Text] [Related]
17. MutSpec: a Galaxy toolbox for streamlined analyses of somatic mutation spectra in human and mouse cancer genomes.
Ardin M; Cahais V; Castells X; Bouaoun L; Byrnes G; Herceg Z; Zavadil J; Olivier M
BMC Bioinformatics; 2016 Apr; 17():170. PubMed ID: 27091472
[TBL] [Abstract][Full Text] [Related]
18. SigsPack, a package for cancer mutational signatures.
Schumann F; Blanc E; Messerschmidt C; Blankenstein T; Busse A; Beule D
BMC Bioinformatics; 2019 Sep; 20(1):450. PubMed ID: 31477009
[TBL] [Abstract][Full Text] [Related]
19. Hidden Markov models lead to higher resolution maps of mutation signature activity in cancer.
Wojtowicz D; Sason I; Huang X; Kim YA; Leiserson MDM; Przytycka TM; Sharan R
Genome Med; 2019 Jul; 11(1):49. PubMed ID: 31349863
[TBL] [Abstract][Full Text] [Related]
20. Bioinformatic Methods to Identify Mutational Signatures in Cancer.
Islam SMA; Alexandrov LB
Methods Mol Biol; 2021; 2185():447-473. PubMed ID: 33165866
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
