These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
137 related articles for article (PubMed ID: 33315215)
1. Disclosing Allostery Through Protein Contact Networks. Di Paola L; Mei G; Di Venere A; Giuliani A Methods Mol Biol; 2021; 2253():7-20. PubMed ID: 33315215 [TBL] [Abstract][Full Text] [Related]
2. Protein contact network topology: a natural language for allostery. Di Paola L; Giuliani A Curr Opin Struct Biol; 2015 Apr; 31():43-8. PubMed ID: 25796032 [TBL] [Abstract][Full Text] [Related]
3. From Quantum Chemistry to Networks in Biology: A Graph Spectral Approach to Protein Structure Analyses. Gadiyaram V; Vishveshwara S; Vishveshwara S J Chem Inf Model; 2019 May; 59(5):1715-1727. PubMed ID: 30912941 [TBL] [Abstract][Full Text] [Related]
4. Allosteric communication occurs via networks of tertiary and quaternary motions in proteins. Daily MD; Gray JJ PLoS Comput Biol; 2009 Feb; 5(2):e1000293. PubMed ID: 19229311 [TBL] [Abstract][Full Text] [Related]
5. Protein Structure and Function: Looking through the Network of Side-Chain Interactions. Bhattacharyya M; Ghosh S; Vishveshwara S Curr Protein Pept Sci; 2016; 17(1):4-25. PubMed ID: 26412788 [TBL] [Abstract][Full Text] [Related]
7. Probing Protein Allostery as a Residue-Specific Concept via Residue Response Maps. Hayatshahi HS; Ahuactzin E; Tao P; Wang S; Liu J J Chem Inf Model; 2019 Nov; 59(11):4691-4705. PubMed ID: 31589429 [TBL] [Abstract][Full Text] [Related]
8. Probing Allosteric Mechanism with Long-Range Rigidity Transmission Across Protein Networks. Sljoka A Methods Mol Biol; 2021; 2253():61-75. PubMed ID: 33315218 [TBL] [Abstract][Full Text] [Related]
9. What Mutagenesis Can and Cannot Reveal About Allostery. Carlson GM; Fenton AW Biophys J; 2016 May; 110(9):1912-23. PubMed ID: 27166800 [TBL] [Abstract][Full Text] [Related]
10. Protein thermal denaturation is modulated by central residues in the protein structure network. Souza VP; Ikegami CM; Arantes GM; Marana SR FEBS J; 2016 Mar; 283(6):1124-38. PubMed ID: 26785700 [TBL] [Abstract][Full Text] [Related]
11. Identification of Allosteric Effects in Proteins by Elastic Network Models. Hu G Methods Mol Biol; 2021; 2253():21-35. PubMed ID: 33315216 [TBL] [Abstract][Full Text] [Related]
13. Contact rearrangements form coupled networks from local motions in allosteric proteins. Daily MD; Upadhyaya TJ; Gray JJ Proteins; 2008 Apr; 71(1):455-66. PubMed ID: 17957766 [TBL] [Abstract][Full Text] [Related]
14. Network Re-Wiring During Allostery and Protein-Protein Interactions: A Graph Spectral Approach. Gadiyaram V; Dighe A; Ghosh S; Vishveshwara S Methods Mol Biol; 2021; 2253():89-112. PubMed ID: 33315220 [TBL] [Abstract][Full Text] [Related]
15. Identifying coupled clusters of allostery participants through chemical shift perturbations. Xu Y; Zhang D; Rogawski R; Nimigean CM; McDermott AE Proc Natl Acad Sci U S A; 2019 Feb; 116(6):2078-2085. PubMed ID: 30679272 [TBL] [Abstract][Full Text] [Related]
16. Are Proteins Just Coiled Cords? Local and Global Analysis of Contact Maps Reveals the Backbone-Dependent Nature of Proteins. Santoni D; Paci P; Di Paola L; Giuliani A Curr Protein Pept Sci; 2016; 17(1):26-9. PubMed ID: 26412790 [TBL] [Abstract][Full Text] [Related]
17. Identifying key residues for protein allostery through rigid residue scan. Kalescky R; Liu J; Tao P J Phys Chem A; 2015 Mar; 119(9):1689-700. PubMed ID: 25437403 [TBL] [Abstract][Full Text] [Related]
18. Piezoelectric allostery of protein. Ohnuki J; Sato T; Takano M Phys Rev E; 2016 Jul; 94(1-1):012406. PubMed ID: 27575163 [TBL] [Abstract][Full Text] [Related]
19. Protein function and allostery: a dynamic relationship. Kalodimos CG Ann N Y Acad Sci; 2012 Jul; 1260():81-6. PubMed ID: 22256894 [TBL] [Abstract][Full Text] [Related]