These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

215 related articles for article (PubMed ID: 33317447)

  • 21. Driver Fusions and Their Implications in the Development and Treatment of Human Cancers.
    Gao Q; Liang WW; Foltz SM; Mutharasu G; Jayasinghe RG; Cao S; Liao WW; Reynolds SM; Wyczalkowski MA; Yao L; Yu L; Sun SQ; ; ; Chen K; Lazar AJ; Fields RC; Wendl MC; Van Tine BA; Vij R; Chen F; Nykter M; Shmulevich I; Ding L
    Cell Rep; 2018 Apr; 23(1):227-238.e3. PubMed ID: 29617662
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Open-access synthetic spike-in mRNA-seq data for cancer gene fusions.
    Tembe WD; Pond SJ; Legendre C; Chuang HY; Liang WS; Kim NE; Montel V; Wong S; McDaniel TK; Craig DW; Carpten JD
    BMC Genomics; 2014 Sep; 15(1):824. PubMed ID: 25266161
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Nefarious NTRK oncogenic fusions in pediatric sarcomas: Too many to Trk.
    Aepala MR; Peiris MN; Jiang Z; Yang W; Meyer AN; Donoghue DJ
    Cytokine Growth Factor Rev; 2022 Dec; 68():93-106. PubMed ID: 36153202
    [TBL] [Abstract][Full Text] [Related]  

  • 24. RNA-Seq mapping and detection of gene fusions with a suffix array algorithm.
    Sakarya O; Breu H; Radovich M; Chen Y; Wang YN; Barbacioru C; Utiramerur S; Whitley PP; Brockman JP; Vatta P; Zhang Z; Popescu L; Muller MW; Kudlingar V; Garg N; Li CY; Kong BS; Bodeau JP; Nutter RC; Gu J; Bramlett KS; Ichikawa JK; Hyland FC; Siddiqui AS
    PLoS Comput Biol; 2012; 8(4):e1002464. PubMed ID: 22496636
    [TBL] [Abstract][Full Text] [Related]  

  • 25. CICERO: a versatile method for detecting complex and diverse driver fusions using cancer RNA sequencing data.
    Tian L; Li Y; Edmonson MN; Zhou X; Newman S; McLeod C; Thrasher A; Liu Y; Tang B; Rusch MC; Easton J; Ma J; Davis E; Trull A; Michael JR; Szlachta K; Mullighan C; Baker SJ; Downing JR; Ellison DW; Zhang J
    Genome Biol; 2020 May; 21(1):126. PubMed ID: 32466770
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Clinical Implementation of MetaFusion for Accurate Cancer-Driving Fusion Detection from RNA Sequencing.
    Apostolides M; Li M; Arnoldo A; Ku M; Husić M; Ramani AK; Brudno M; Turinsky A; Hawkins C; Siddaway R
    J Mol Diagn; 2023 Dec; 25(12):921-931. PubMed ID: 37748705
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Fusions involving BCOR and CREBBP are rare events in infiltrating glioma.
    Pisapia DJ; Ohara K; Bareja R; Wilkes DC; Hissong E; Croyle JA; Kim JH; Saab J; MacDonald TY; Beg S; O'Reilly C; Kudman S; Rubin MA; Elemento O; Sboner A; Greenfield J; Mosquera JM
    Acta Neuropathol Commun; 2020 Jun; 8(1):80. PubMed ID: 32493417
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Analysis of Cell-Free DNA from 32,989 Advanced Cancers Reveals Novel Co-occurring Activating
    Rich TA; Reckamp KL; Chae YK; Doebele RC; Iams WT; Oh M; Raymond VM; Lanman RB; Riess JW; Stinchcombe TE; Subbiah V; Trevarthen DR; Fairclough S; Yen J; Gautschi O
    Clin Cancer Res; 2019 Oct; 25(19):5832-5842. PubMed ID: 31300450
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Development and Clinical Validation of a Large Fusion Gene Panel for Pediatric Cancers.
    Chang F; Lin F; Cao K; Surrey LF; Aplenc R; Bagatell R; Resnick AC; Santi M; Storm PB; Tasian SK; Waanders AJ; Hunger SP; Li MM
    J Mol Diagn; 2019 Sep; 21(5):873-883. PubMed ID: 31255796
    [TBL] [Abstract][Full Text] [Related]  

  • 30. TumorFusions: an integrative resource for cancer-associated transcript fusions.
    Hu X; Wang Q; Tang M; Barthel F; Amin S; Yoshihara K; Lang FM; Martinez-Ledesma E; Lee SH; Zheng S; Verhaak RGW
    Nucleic Acids Res; 2018 Jan; 46(D1):D1144-D1149. PubMed ID: 29099951
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Statistical algorithms improve accuracy of gene fusion detection.
    Hsieh G; Bierman R; Szabo L; Lee AG; Freeman DE; Watson N; Sweet-Cordero EA; Salzman J
    Nucleic Acids Res; 2017 Jul; 45(13):e126. PubMed ID: 28541529
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Exploration of the gene fusion landscape of glioblastoma using transcriptome sequencing and copy number data.
    Shah N; Lankerovich M; Lee H; Yoon JG; Schroeder B; Foltz G
    BMC Genomics; 2013 Nov; 14(1):818. PubMed ID: 24261984
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Detecting and visualizing gene fusions.
    Supper J; Gugenmus C; Wollnik J; Drueke T; Scherf M; Hahn A; Grote K; Bretschneider N; Klocke B; Zinser C; Cartharius K; Seifert M
    Methods; 2013 Jan; 59(1):S24-8. PubMed ID: 23036331
    [TBL] [Abstract][Full Text] [Related]  

  • 34. ChimPipe: accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data.
    Rodríguez-Martín B; Palumbo E; Marco-Sola S; Griebel T; Ribeca P; Alonso G; Rastrojo A; Aguado B; Guigó R; Djebali S
    BMC Genomics; 2017 Jan; 18(1):7. PubMed ID: 28049418
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Comprehensive evaluation of fusion transcript detection algorithms and a meta-caller to combine top performing methods in paired-end RNA-seq data.
    Liu S; Tsai WH; Ding Y; Chen R; Fang Z; Huo Z; Kim S; Ma T; Chang TY; Priedigkeit NM; Lee AV; Luo J; Wang HW; Chung IF; Tseng GC
    Nucleic Acids Res; 2016 Mar; 44(5):e47. PubMed ID: 26582927
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Massive NGS data analysis reveals hundreds of potential novel gene fusions in human cell lines.
    Gioiosa S; Bolis M; Flati T; Massini A; Garattini E; Chillemi G; Fratelli M; Castrignanò T
    Gigascience; 2018 Oct; 7(10):. PubMed ID: 29860514
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Fast and sensitive validation of fusion transcripts in whole-genome sequencing data.
    Hafstað V; Häkkinen J; Persson H
    BMC Bioinformatics; 2023 Sep; 24(1):359. PubMed ID: 37741966
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Pan-tumor screening for NTRK gene fusions using pan-TRK immunohistochemistry and RNA NGS fusion panel testing.
    Koehne de González A; Mansukhani MM; Fernandes H; Hsiao SJ
    Cancer Genet; 2022 Apr; 262-263():47-52. PubMed ID: 35007853
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Diagnosis and management of TRK fusion cancer.
    Kummar S; Italiano A; Brose MS; Carlson JJ; Sullivan SD; Lassen U; Federman N
    Am J Manag Care; 2022 Jan; 28(2 Suppl):S15-S25. PubMed ID: 35201680
    [TBL] [Abstract][Full Text] [Related]  

  • 40. DriverFuse: An R package for analysis of next-generation sequencing datasets to identify cancer driver fusion genes.
    Roy S; Gupta D
    PLoS One; 2022; 17(2):e0262686. PubMed ID: 35113898
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 11.