These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
119 related articles for article (PubMed ID: 33346833)
1. Minimally overlapping words for sequence similarity search. Frith MC; Noé L; Kucherov G Bioinformatics; 2021 Apr; 36(22-23):5344-5350. PubMed ID: 33346833 [TBL] [Abstract][Full Text] [Related]
2. How to optimally sample a sequence for rapid analysis. Frith MC; Shaw J; Spouge JL Bioinformatics; 2023 Feb; 39(2):. PubMed ID: 36702468 [TBL] [Abstract][Full Text] [Related]
3. Accurate multiple alignment of distantly related genome sequences using filtered spaced word matches as anchor points. Leimeister CA; Dencker T; Morgenstern B Bioinformatics; 2019 Jan; 35(2):211-218. PubMed ID: 29992260 [TBL] [Abstract][Full Text] [Related]
4. Index suffix-prefix overlaps by (w, k)-minimizer to generate long contigs for reads compression. Liu Y; Yu Z; Dinger ME; Li J Bioinformatics; 2019 Jun; 35(12):2066-2074. PubMed ID: 30407482 [TBL] [Abstract][Full Text] [Related]
5. Fast and accurate phylogeny reconstruction using filtered spaced-word matches. Leimeister CA; Sohrabi-Jahromi S; Morgenstern B Bioinformatics; 2017 Apr; 33(7):971-979. PubMed ID: 28073754 [TBL] [Abstract][Full Text] [Related]
6. Folic acid supplementation and malaria susceptibility and severity among people taking antifolate antimalarial drugs in endemic areas. Crider K; Williams J; Qi YP; Gutman J; Yeung L; Mai C; Finkelstain J; Mehta S; Pons-Duran C; Menéndez C; Moraleda C; Rogers L; Daniels K; Green P Cochrane Database Syst Rev; 2022 Feb; 2(2022):. PubMed ID: 36321557 [TBL] [Abstract][Full Text] [Related]
7. BWA-MEME: BWA-MEM emulated with a machine learning approach. Jung Y; Han D Bioinformatics; 2022 Apr; 38(9):2404-2413. PubMed ID: 35253835 [TBL] [Abstract][Full Text] [Related]
10. FSH: fast spaced seed hashing exploiting adjacent hashes. Girotto S; Comin M; Pizzi C Algorithms Mol Biol; 2018; 13():8. PubMed ID: 29588651 [TBL] [Abstract][Full Text] [Related]
11. Spaced words and kmacs: fast alignment-free sequence comparison based on inexact word matches. Horwege S; Lindner S; Boden M; Hatje K; Kollmar M; Leimeister CA; Morgenstern B Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W7-11. PubMed ID: 24829447 [TBL] [Abstract][Full Text] [Related]
13. QuasiSeq: profiling viral quasispecies via self-tuning spectral clustering with PacBio long sequencing reads. Jiao X; Imamichi H; Sherman BT; Nahar R; Dewar RL; Lane HC; Imamichi T; Chang W Bioinformatics; 2022 Jun; 38(12):3192-3199. PubMed ID: 35532087 [TBL] [Abstract][Full Text] [Related]
14. The minimizer Jaccard estimator is biased and inconsistent. Belbasi M; Blanca A; Harris RS; Koslicki D; Medvedev P Bioinformatics; 2022 Jun; 38(Suppl 1):i169-i176. PubMed ID: 35758786 [TBL] [Abstract][Full Text] [Related]
15. Theory of local k-mer selection with applications to long-read alignment. Shaw J; Yu YW Bioinformatics; 2022 Oct; 38(20):4659-4669. PubMed ID: 36124869 [TBL] [Abstract][Full Text] [Related]
16. SpEED: fast computation of sensitive spaced seeds. Ilie L; Ilie S; Bigvand AM Bioinformatics; 2011 Sep; 27(17):2433-4. PubMed ID: 21690104 [TBL] [Abstract][Full Text] [Related]
17. AC-DIAMOND v1: accelerating large-scale DNA-protein alignment. Mai H; Zhang Y; Li D; Leung HC; Luo R; Wong CK; Ting HF; Lam TW Bioinformatics; 2018 Nov; 34(21):3744-3746. PubMed ID: 29771282 [TBL] [Abstract][Full Text] [Related]
18. LZW-Kernel: fast kernel utilizing variable length code blocks from LZW compressors for protein sequence classification. Filatov G; Bauwens B; Kertész-Farkas A Bioinformatics; 2018 Oct; 34(19):3281-3288. PubMed ID: 29741583 [TBL] [Abstract][Full Text] [Related]
19. rHAT: fast alignment of noisy long reads with regional hashing. Liu B; Guan D; Teng M; Wang Y Bioinformatics; 2016 Jun; 32(11):1625-31. PubMed ID: 26568628 [TBL] [Abstract][Full Text] [Related]