These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

129 related articles for article (PubMed ID: 33381825)

  • 1. Finding orthologous gene blocks in bacteria: the computational hardness of the problem and novel methods to address it.
    Nguyen HN; Markin A; Friedberg I; Eulenstein O
    Bioinformatics; 2020 Dec; 36(Suppl_2):i668-i674. PubMed ID: 33381825
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Tracing the ancestry of operons in bacteria.
    Nguyen HN; Jain A; Eulenstein O; Friedberg I
    Bioinformatics; 2019 Sep; 35(17):2998-3004. PubMed ID: 30689726
    [TBL] [Abstract][Full Text] [Related]  

  • 3. An event-driven approach for studying gene block evolution in bacteria.
    Ream DC; Bankapur AR; Friedberg I
    Bioinformatics; 2015 Jul; 31(13):2075-83. PubMed ID: 25717195
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Reconstruction of ancestral genomic sequences using likelihood.
    Elias I; Tuller T
    J Comput Biol; 2007 Mar; 14(2):216-37. PubMed ID: 17456016
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Complexity and Algorithms for Finding a Perfect Phylogeny from Mixed Tumor Samples.
    Hujdurovic A; Kacar U; Milanic M; Ries B; Tomescu AI
    IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(1):96-108. PubMed ID: 28113405
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Clonal reconstruction from time course genomic sequencing data.
    Ismail WM; Tang H
    BMC Genomics; 2019 Dec; 20(Suppl 12):1002. PubMed ID: 31888455
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The SCJ Small Parsimony Problem for Weighted Gene Adjacencies.
    Luhmann N; Lafond M; Thevenin A; Ouangraoua A; Wittler R; Chauve C
    IEEE/ACM Trans Comput Biol Bioinform; 2019; 16(4):1364-1373. PubMed ID: 28166504
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Discovery of multi-operon colinear syntenic blocks in microbial genomes.
    Svetlitsky D; Dagan T; Ziv-Ukelson M
    Bioinformatics; 2020 Jul; 36(Suppl_1):i21-i29. PubMed ID: 32657415
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Sequoya: multiobjective multiple sequence alignment in Python.
    Benítez-Hidalgo A; Nebro AJ; Aldana-Montes JF
    Bioinformatics; 2020 Jun; 36(12):3892-3893. PubMed ID: 32315391
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Optimal in silico target gene deletion through nonlinear programming for genetic engineering.
    Hong CC; Song M
    PLoS One; 2010 Feb; 5(2):e9331. PubMed ID: 20195367
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Spathial: an R package for the evolutionary analysis of biological data.
    Gardini E; Giorgi FM; Decherchi S; Cavalli A
    Bioinformatics; 2020 Nov; 36(17):4664-4667. PubMed ID: 32437522
    [TBL] [Abstract][Full Text] [Related]  

  • 12. On the consistency of orthology relationships.
    Jones M; Paul C; Scornavacca C
    BMC Bioinformatics; 2016 Nov; 17(Suppl 14):416. PubMed ID: 28185580
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Efficient algorithms for reconstructing gene content by co-evolution.
    Birin H; Tuller T
    BMC Bioinformatics; 2011 Oct; 12 Suppl 9(Suppl 9):S12. PubMed ID: 22151715
    [TBL] [Abstract][Full Text] [Related]  

  • 14. JustOrthologs: a fast, accurate and user-friendly ortholog identification algorithm.
    Miller JB; Pickett BD; Ridge PG
    Bioinformatics; 2019 Feb; 35(4):546-552. PubMed ID: 30084941
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Operon-based approach for the inference of rRNA and tRNA evolutionary histories in bacteria.
    Pawliszak T; Chua M; Leung CK; Tremblay-Savard O
    BMC Genomics; 2020 Apr; 21(Suppl 2):252. PubMed ID: 32299351
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Assignment of orthologous genes via genome rearrangement.
    Chen X; Zheng J; Fu Z; Nan P; Zhong Y; Lonardi S; Jiang T
    IEEE/ACM Trans Comput Biol Bioinform; 2005; 2(4):302-15. PubMed ID: 17044168
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Fast ancestral gene order reconstruction of genomes with unequal gene content.
    Feijão P; Araujo E
    BMC Bioinformatics; 2016 Nov; 17(Suppl 14):413. PubMed ID: 28185578
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Chromosome structures: reduction of certain problems with unequal gene content and gene paralogs to integer linear programming.
    Lyubetsky V; Gershgorin R; Gorbunov K
    BMC Bioinformatics; 2017 Dec; 18(1):537. PubMed ID: 29212445
    [TBL] [Abstract][Full Text] [Related]  

  • 19. ManiNetCluster: a novel manifold learning approach to reveal the functional links between gene networks.
    Nguyen ND; Blaby IK; Wang D
    BMC Genomics; 2019 Dec; 20(Suppl 12):1003. PubMed ID: 31888454
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Introducing TreeCollapse: a novel greedy algorithm to solve the cophylogeny reconstruction problem.
    Drinkwater B; Charleston MA
    BMC Bioinformatics; 2014; 15 Suppl 16(Suppl 16):S14. PubMed ID: 25521705
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.