These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

174 related articles for article (PubMed ID: 33406597)

  • 1. Rapid Diagnostics of Orthopaedic-Implant-Associated Infections Using Nanopore Shotgun Metagenomic Sequencing on Tissue Biopsies.
    Noone JC; Helmersen K; Leegaard TM; Skråmm I; Aamot HV
    Microorganisms; 2021 Jan; 9(1):. PubMed ID: 33406597
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Culture-Independent Genotyping, Virulence and Antimicrobial Resistance Gene Identification of
    Noone JC; Ferreira FA; Aamot HV
    Microorganisms; 2021 Mar; 9(4):. PubMed ID: 33808095
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Preliminary assessment of nanopore-based metagenomic sequencing for the diagnosis of prosthetic joint infection.
    Wang CX; Huang Z; Fang W; Zhang Z; Fang X; Li W; Yang B; Chen L; Liang X; Hu H; Shi D; Lee S; Zhang W
    Int J Infect Dis; 2020 Aug; 97():54-59. PubMed ID: 32439542
    [TBL] [Abstract][Full Text] [Related]  

  • 4. DNA extraction of microbial DNA directly from infected tissue: an optimized protocol for use in nanopore sequencing.
    Helmersen K; Aamot HV
    Sci Rep; 2020 Feb; 10(1):2985. PubMed ID: 32076089
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Real-time analysis of nanopore-based metagenomic sequencing from infected orthopaedic devices.
    Sanderson ND; Street TL; Foster D; Swann J; Atkins BL; Brent AJ; McNally MA; Oakley S; Taylor A; Peto TEA; Crook DW; Eyre DW
    BMC Genomics; 2018 Sep; 19(1):714. PubMed ID: 30261842
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Metagenomic identification of severe pneumonia pathogens in mechanically-ventilated patients: a feasibility and clinical validity study.
    Yang L; Haidar G; Zia H; Nettles R; Qin S; Wang X; Shah F; Rapport SF; Charalampous T; Methé B; Fitch A; Morris A; McVerry BJ; O'Grady J; Kitsios GD
    Respir Res; 2019 Nov; 20(1):265. PubMed ID: 31775777
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Identification of pathogen(s) in infectious diseases using shotgun metagenomic sequencing and conventional culture: a comparative study.
    Chen H; Li J; Yan S; Sun H; Tan C; Liu M; Liu K; Zhang H; Zou M; Xiao X
    PeerJ; 2021; 9():e11699. PubMed ID: 34249516
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Optimizing Nanopore Sequencing for Rapid Detection of Microbial Species and Antimicrobial Resistance in Patients at Risk of Surgical Site Infections.
    Whittle E; Yonkus JA; Jeraldo P; Alva-Ruiz R; Nelson H; Kendrick ML; Grys TE; Patel R; Truty MJ; Chia N
    mSphere; 2022 Feb; 7(1):e0096421. PubMed ID: 35171692
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Are conventional microbiological diagnostics sufficiently expedient in the era of rapid diagnostics? Evaluation of conventional microbiological diagnostics of orthopedic implant-associated infections (OIAI).
    Aamot HV; Noone JC; Skråmm I; Leegaard TM
    Acta Orthop; 2021 Apr; 92(2):204-207. PubMed ID: 33167775
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Clinical Metagenomic Sequencing for Species Identification and Antimicrobial Resistance Prediction in Orthopedic Device Infection.
    Street TL; Sanderson ND; Kolenda C; Kavanagh J; Pickford H; Hoosdally S; Cregan J; Taunt C; Jones E; Oakley S; Atkins BL; Dudareva M; McNally MA; O'Grady J; Crook DW; Eyre DW
    J Clin Microbiol; 2022 Apr; 60(4):e0215621. PubMed ID: 35354286
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Shotgun sequencing of sonication fluid for the diagnosis of orthopaedic implant-associated infections with
    Ponraj DS; Lund M; Lange J; Poehlein A; Himmelbach A; Falstie-Jensen T; Jørgensen NP; Ravn C; Brüggemann H
    Front Cell Infect Microbiol; 2023; 13():1165017. PubMed ID: 37265503
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing.
    Taxt AM; Avershina E; Frye SA; Naseer U; Ahmad R
    Sci Rep; 2020 May; 10(1):7622. PubMed ID: 32376847
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Rapid Detection of Bacterial Pathogens and Antimicrobial Resistance Genes in Clinical Urine Samples With Urinary Tract Infection by Metagenomic Nanopore Sequencing.
    Zhang L; Huang W; Zhang S; Li Q; Wang Y; Chen T; Jiang H; Kong D; Lv Q; Zheng Y; Ren Y; Liu P; Jiang Y; Chen Y
    Front Microbiol; 2022; 13():858777. PubMed ID: 35655992
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Nanopore-based metagenomic sequencing for the rapid and precise detection of pathogens among immunocompromised cancer patients with suspected infections.
    Deng Q; Cao Y; Wan X; Wang B; Sun A; Wang H; Wang Y; Wang H; Gu H
    Front Cell Infect Microbiol; 2022; 12():943859. PubMed ID: 36204638
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Rapid diagnostics of orthopedic implant-associated infections using Unyvero ITI implant and tissue infection application is not optimal for Staphylococcus species identification.
    Aamot HV; Johnsen BO; Skråmm I
    BMC Res Notes; 2019 Nov; 12(1):725. PubMed ID: 31694724
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Metagenomic identification of pathogens and antimicrobial-resistant genes in bacterial positive blood cultures by nanopore sequencing.
    Liu Y; Xu Y; Xu X; Chen X; Chen H; Zhang J; Ma J; Zhang W; Zhang R; Chen J
    Front Cell Infect Microbiol; 2023; 13():1283094. PubMed ID: 38192400
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Optimising Treatment Outcomes for Children and Adults Through Rapid Genome Sequencing of Sepsis Pathogens. A Study Protocol for a Prospective, Multi-Centre Trial (DIRECT).
    Irwin AD; Coin LJM; Harris PNA; Cotta MO; Bauer MJ; Buckley C; Balch R; Kruger P; Meyer J; Shekar K; Brady K; Fourie C; Sharp N; Vlad L; Whiley D; Beatson SA; Forde BM; Paterson D; Clark J; Hajkowicz K; Raman S; Bialasiewicz S; Lipman J; Schlapbach LJ; Roberts JA
    Front Cell Infect Microbiol; 2021; 11():667680. PubMed ID: 34249774
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Applying Rapid Whole-Genome Sequencing To Predict Phenotypic Antimicrobial Susceptibility Testing Results among Carbapenem-Resistant Klebsiella pneumoniae Clinical Isolates.
    Tamma PD; Fan Y; Bergman Y; Pertea G; Kazmi AQ; Lewis S; Carroll KC; Schatz MC; Timp W; Simner PJ
    Antimicrob Agents Chemother; 2019 Jan; 63(1):. PubMed ID: 30373801
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Direct Detection and Identification of Prosthetic Joint Infection Pathogens in Synovial Fluid by Metagenomic Shotgun Sequencing.
    Ivy MI; Thoendel MJ; Jeraldo PR; Greenwood-Quaintance KE; Hanssen AD; Abdel MP; Chia N; Yao JZ; Tande AJ; Mandrekar JN; Patel R
    J Clin Microbiol; 2018 Sep; 56(9):. PubMed ID: 29848568
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Oxford nanopore sequencing in clinical microbiology and infection diagnostics.
    Sheka D; Alabi N; Gordon PMK
    Brief Bioinform; 2021 Sep; 22(5):. PubMed ID: 33483726
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.