BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

361 related articles for article (PubMed ID: 33432244)

  • 1. High-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing.
    Karst SM; Ziels RM; Kirkegaard RH; Sørensen EA; McDonald D; Zhu Q; Knight R; Albertsen M
    Nat Methods; 2021 Feb; 18(2):165-169. PubMed ID: 33432244
    [TBL] [Abstract][Full Text] [Related]  

  • 2. The newest Oxford Nanopore R10.4.1 full-length 16S rRNA sequencing enables the accurate resolution of species-level microbial community profiling.
    Zhang T; Li H; Ma S; Cao J; Liao H; Huang Q; Chen W
    Appl Environ Microbiol; 2023 Oct; 89(10):e0060523. PubMed ID: 37800969
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens.
    Bogaerts B; Van den Bossche A; Verhaegen B; Delbrassinne L; Mattheus W; Nouws S; Godfroid M; Hoffman S; Roosens NHC; De Keersmaecker SCJ; Vanneste K
    J Clin Microbiol; 2024 May; 62(5):e0157623. PubMed ID: 38441926
    [TBL] [Abstract][Full Text] [Related]  

  • 4. R2C2+UMI: Combining concatemeric consensus sequencing with unique molecular identifiers enables ultra-accurate sequencing of amplicons on Oxford Nanopore Technologies sequencers.
    Deng DZQ; Verhage J; Neudorf C; Corbett-Detig R; Mekonen H; Castaldi PJ; Vollmers C
    bioRxiv; 2023 Aug; ():. PubMed ID: 37662385
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Optimization of Oxford Nanopore Technology Sequencing Workflow for Detection of Amplicons in Real Time Using ONT-DART Tool.
    Player R; Verratti K; Staab A; Forsyth E; Ernlund A; Joshi MS; Dunning R; Rozak D; Grady S; Goodwin B; Sozhamannan S
    Genes (Basel); 2022 Oct; 13(10):. PubMed ID: 36292670
    [TBL] [Abstract][Full Text] [Related]  

  • 6. NanoAmpli-Seq: a workflow for amplicon sequencing for mixed microbial communities on the nanopore sequencing platform.
    Calus ST; Ijaz UZ; Pinto AJ
    Gigascience; 2018 Dec; 7(12):. PubMed ID: 30476081
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Perspectives and Benefits of High-Throughput Long-Read Sequencing in Microbial Ecology.
    Tedersoo L; Albertsen M; Anslan S; Callahan B
    Appl Environ Microbiol; 2021 Aug; 87(17):e0062621. PubMed ID: 34132589
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Comparison of Illumina versus Nanopore 16S rRNA Gene Sequencing of the Human Nasal Microbiota.
    Heikema AP; Horst-Kreft D; Boers SA; Jansen R; Hiltemann SD; de Koning W; Kraaij R; de Ridder MAJ; van Houten CB; Bont LJ; Stubbs AP; Hays JP
    Genes (Basel); 2020 Sep; 11(9):. PubMed ID: 32967250
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Highly-multiplexed and efficient long-amplicon PacBio and Nanopore sequencing of hundreds of full mitochondrial genomes.
    Karin BR; Arellano S; Wang L; Walzer K; Pomerantz A; Vasquez JM; Chatla K; Sudmant PH; Bach BH; Smith LL; McGuire JA
    BMC Genomics; 2023 May; 24(1):229. PubMed ID: 37131128
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Comparison of R9.4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction.
    Sanderson ND; Kapel N; Rodger G; Webster H; Lipworth S; Street TL; Peto T; Crook D; Stoesser N
    Microb Genom; 2023 Jan; 9(1):. PubMed ID: 36748454
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Deep mining of antibody phage-display selections using Oxford Nanopore Technologies and Dual Unique Molecular Identifiers.
    Mejias-Gomez O; Braghetto M; Sørensen MKD; Madsen AV; Guiu LS; Kristensen P; Pedersen LE; Goletz S
    N Biotechnol; 2024 May; 80():56-68. PubMed ID: 38354946
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Improving nanopore read accuracy with the R2C2 method enables the sequencing of highly multiplexed full-length single-cell cDNA.
    Volden R; Palmer T; Byrne A; Cole C; Schmitz RJ; Green RE; Vollmers C
    Proc Natl Acad Sci U S A; 2018 Sep; 115(39):9726-9731. PubMed ID: 30201725
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Sequencing of individual barcoded cDNAs using Pacific Biosciences and Oxford Nanopore Technologies reveals platform-specific error patterns.
    Mikheenko A; Prjibelski AD; Joglekar A; Tilgner HU
    Genome Res; 2022 Apr; 32(4):726-737. PubMed ID: 35301264
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Initial Analysis of Structural Variation Detections in Cattle Using Long-Read Sequencing Methods.
    Gao Y; Ma L; Liu GE
    Genes (Basel); 2022 May; 13(5):. PubMed ID: 35627213
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Sequencing Illumina libraries at high accuracy on the ONT MinION using R2C2.
    Zee A; Deng DZQ; Adams M; Schimke KD; Corbett-Detig R; Russell SL; Zhang X; Schmitz RJ; Vollmers C
    Genome Res; 2022; 32(11-12):2092-2106. PubMed ID: 36351772
    [TBL] [Abstract][Full Text] [Related]  

  • 16. NGSpeciesID: DNA barcode and amplicon consensus generation from long-read sequencing data.
    Sahlin K; Lim MCW; Prost S
    Ecol Evol; 2021 Feb; 11(3):1392-1398. PubMed ID: 33598139
    [TBL] [Abstract][Full Text] [Related]  

  • 17. ECNano: A cost-effective workflow for target enrichment sequencing and accurate variant calling on 4800 clinically significant genes using a single MinION flowcell.
    Leung AW; Leung HC; Wong CL; Zheng ZX; Lui WW; Luk HM; Lo IF; Luo R; Lam TW
    BMC Med Genomics; 2022 Mar; 15(1):43. PubMed ID: 35246132
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Relative Performance of MinION (Oxford Nanopore Technologies) versus Sequel (Pacific Biosciences) Third-Generation Sequencing Instruments in Identification of Agricultural and Forest Fungal Pathogens.
    Loit K; Adamson K; Bahram M; Puusepp R; Anslan S; Kiiker R; Drenkhan R; Tedersoo L
    Appl Environ Microbiol; 2019 Nov; 85(21):. PubMed ID: 31444199
    [TBL] [Abstract][Full Text] [Related]  

  • 19. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
    Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
    Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Clustering of circular consensus sequences: accurate error correction and assembly of single molecule real-time reads from multiplexed amplicon libraries.
    Francis F; Dumas MD; Davis SB; Wisser RJ
    BMC Bioinformatics; 2018 Aug; 19(1):302. PubMed ID: 30126356
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 19.