BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

370 related articles for article (PubMed ID: 33462291)

  • 1. The effect of taxonomic classification by full-length 16S rRNA sequencing with a synthetic long-read technology.
    Jeong J; Yun K; Mun S; Chung WH; Choi SY; Nam YD; Lim MY; Hong CP; Park C; Ahn YJ; Han K
    Sci Rep; 2021 Jan; 11(1):1727. PubMed ID: 33462291
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A multi-amplicon 16S rRNA sequencing and analysis method for improved taxonomic profiling of bacterial communities.
    Schriefer AE; Cliften PF; Hibberd MC; Sawyer C; Brown-Kennerly V; Burcea L; Klotz E; Crosby SD; Gordon JI; Head RD
    J Microbiol Methods; 2018 Nov; 154():6-13. PubMed ID: 30273610
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Analysis of the mouse gut microbiome using full-length 16S rRNA amplicon sequencing.
    Shin J; Lee S; Go MJ; Lee SY; Kim SC; Lee CH; Cho BK
    Sci Rep; 2016 Jul; 6():29681. PubMed ID: 27411898
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution.
    Matsuo Y; Komiya S; Yasumizu Y; Yasuoka Y; Mizushima K; Takagi T; Kryukov K; Fukuda A; Morimoto Y; Naito Y; Okada H; Bono H; Nakagawa S; Hirota K
    BMC Microbiol; 2021 Jan; 21(1):35. PubMed ID: 33499799
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Species-level bacterial community profiling of the healthy sinonasal microbiome using Pacific Biosciences sequencing of full-length 16S rRNA genes.
    Earl JP; Adappa ND; Krol J; Bhat AS; Balashov S; Ehrlich RL; Palmer JN; Workman AD; Blasetti M; Sen B; Hammond J; Cohen NA; Ehrlich GD; Mell JC
    Microbiome; 2018 Oct; 6(1):190. PubMed ID: 30352611
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A comparison between full-length 16S rRNA Oxford nanopore sequencing and Illumina V3-V4 16S rRNA sequencing in head and neck cancer tissues.
    Yeo K; Connell J; Bouras G; Smith E; Murphy W; Hodge JC; Krishnan S; Wormald PJ; Valentine R; Psaltis AJ; Vreugde S; Fenix KA
    Arch Microbiol; 2024 May; 206(6):248. PubMed ID: 38713383
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Evaluation of 16S rRNA amplicon sequencing using two next-generation sequencing technologies for phylogenetic analysis of the rumen bacterial community in steers.
    Myer PR; Kim M; Freetly HC; Smith TPL
    J Microbiol Methods; 2016 Aug; 127():132-140. PubMed ID: 27282101
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Characterization of Fecal Microbiota with Clinical Specimen Using Long-Read and Short-Read Sequencing Platform.
    Wei PL; Hung CS; Kao YW; Lin YC; Lee CY; Chang TH; Shia BC; Lin JC
    Int J Mol Sci; 2020 Sep; 21(19):. PubMed ID: 32993155
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
    Castelino M; Eyre S; Moat J; Fox G; Martin P; Ho P; Upton M; Barton A
    BMC Microbiol; 2017 Jan; 17(1):23. PubMed ID: 28109256
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Evaluation of Full-Length Versus V4-Region 16S rRNA Sequencing for Phylogenetic Analysis of Mouse Intestinal Microbiota After a Dietary Intervention.
    Katiraei S; Anvar Y; Hoving L; Berbée JFP; van Harmelen V; Willems van Dijk K
    Curr Microbiol; 2022 Jul; 79(9):276. PubMed ID: 35907023
    [TBL] [Abstract][Full Text] [Related]  

  • 11. High-throughput DNA extraction strategy for fecal microbiome studies.
    Isokääntä H; Tomnikov N; Vanhatalo S; Munukka E; Huovinen P; Hakanen AJ; Kallonen T
    Microbiol Spectr; 2024 Jun; 12(6):e0293223. PubMed ID: 38747618
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Different next generation sequencing platforms produce different microbial profiles and diversity in cystic fibrosis sputum.
    Hahn A; Sanyal A; Perez GF; Colberg-Poley AM; Campos J; Rose MC; Pérez-Losada M
    J Microbiol Methods; 2016 Nov; 130():95-99. PubMed ID: 27609714
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Microbial Identification Using rRNA Operon Region: Database and Tool for Metataxonomics with Long-Read Sequence.
    Seol D; Lim JS; Sung S; Lee YH; Jeong M; Cho S; Kwak W; Kim H
    Microbiol Spectr; 2022 Apr; 10(2):e0201721. PubMed ID: 35352997
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification.
    Wagner J; Coupland P; Browne HP; Lawley TD; Francis SC; Parkhill J
    BMC Microbiol; 2016 Nov; 16(1):274. PubMed ID: 27842515
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Full-length 16S rRNA gene sequencing by PacBio improves taxonomic resolution in human microbiome samples.
    Buetas E; Jordán-López M; López-Roldán A; D'Auria G; Martínez-Priego L; De Marco G; Carda-Diéguez M; Mira A
    BMC Genomics; 2024 Mar; 25(1):310. PubMed ID: 38528457
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification.
    Ziesemer KA; Mann AE; Sankaranarayanan K; Schroeder H; Ozga AT; Brandt BW; Zaura E; Waters-Rist A; Hoogland M; Salazar-García DC; Aldenderfer M; Speller C; Hendy J; Weston DA; MacDonald SJ; Thomas GH; Collins MJ; Lewis CM; Hofman C; Warinner C
    Sci Rep; 2015 Nov; 5():16498. PubMed ID: 26563586
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A comparison of sequencing platforms and bioinformatics pipelines for compositional analysis of the gut microbiome.
    Allali I; Arnold JW; Roach J; Cadenas MB; Butz N; Hassan HM; Koci M; Ballou A; Mendoza M; Ali R; Azcarate-Peril MA
    BMC Microbiol; 2017 Sep; 17(1):194. PubMed ID: 28903732
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Are all faecal bacteria detected with equal efficiency? A study using next-generation sequencing and quantitative culture of infants' faecal samples.
    Sjöberg F; Nookaew I; Yazdanshenas S; Gio-Batta M; Adlerberth I; Wold AE
    J Microbiol Methods; 2020 Oct; 177():106018. PubMed ID: 32795633
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Primer, Pipelines, Parameters: Issues in 16S rRNA Gene Sequencing.
    Abellan-Schneyder I; Matchado MS; Reitmeier S; Sommer A; Sewald Z; Baumbach J; List M; Neuhaus K
    mSphere; 2021 Feb; 6(1):. PubMed ID: 33627512
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis.
    Johnson JS; Spakowicz DJ; Hong BY; Petersen LM; Demkowicz P; Chen L; Leopold SR; Hanson BM; Agresta HO; Gerstein M; Sodergren E; Weinstock GM
    Nat Commun; 2019 Nov; 10(1):5029. PubMed ID: 31695033
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 19.