205 related articles for article (PubMed ID: 33558240)
1. Torsional stress can regulate the unwrapping of two outer half superhelical turns of nucleosomal DNA.
Ishida H; Kono H
Proc Natl Acad Sci U S A; 2021 Feb; 118(7):. PubMed ID: 33558240
[TBL] [Abstract][Full Text] [Related]
2. Free energy profiles for unwrapping the outer superhelical turn of nucleosomal DNA.
Kono H; Sakuraba S; Ishida H
PLoS Comput Biol; 2018 Mar; 14(3):e1006024. PubMed ID: 29505570
[TBL] [Abstract][Full Text] [Related]
3. Histone octamer rearranges to adapt to DNA unwrapping.
Bilokapic S; Strauss M; Halic M
Nat Struct Mol Biol; 2018 Jan; 25(1):101-108. PubMed ID: 29323273
[TBL] [Abstract][Full Text] [Related]
4. Partial Unwrapping and Histone Tail Dynamics in Nucleosome Revealed by Coarse-Grained Molecular Simulations.
Kenzaki H; Takada S
PLoS Comput Biol; 2015 Aug; 11(8):e1004443. PubMed ID: 26262925
[TBL] [Abstract][Full Text] [Related]
5. Quantitative Modeling of Nucleosome Unwrapping from Both Ends.
Zhao D; Le JV; Darcy MA; Crocker K; Poirier MG; Castro C; Bundschuh R
Biophys J; 2019 Dec; 117(11):2204-2216. PubMed ID: 31732143
[TBL] [Abstract][Full Text] [Related]
6. Dissecting DNA-histone interactions in the nucleosome by molecular dynamics simulations of DNA unwrapping.
Ettig R; Kepper N; Stehr R; Wedemann G; Rippe K
Biophys J; 2011 Oct; 101(8):1999-2008. PubMed ID: 22004754
[TBL] [Abstract][Full Text] [Related]
7. Torque modulates nucleosome stability and facilitates H2A/H2B dimer loss.
Sheinin MY; Li M; Soltani M; Luger K; Wang MD
Nat Commun; 2013; 4():2579. PubMed ID: 24113677
[TBL] [Abstract][Full Text] [Related]
8. Effects of DNA Superhelical Stress on the Stability of H2B-Ubiquitylated Nucleosomes.
Krajewski WA
J Mol Biol; 2018 Dec; 430(24):5002-5014. PubMed ID: 30267746
[TBL] [Abstract][Full Text] [Related]
9. Molecular Mechanism for the Role of the H2A and H2B Histone Tails in Nucleosome Repositioning.
Chakraborty K; Kang M; Loverde SM
J Phys Chem B; 2018 Dec; 122(50):11827-11840. PubMed ID: 30477297
[TBL] [Abstract][Full Text] [Related]
10. Dynamics of forced nucleosome unraveling and role of nonuniform histone-DNA interactions.
Dobrovolskaia IV; Arya G
Biophys J; 2012 Sep; 103(5):989-98. PubMed ID: 23009848
[TBL] [Abstract][Full Text] [Related]
11. Single-Molecule Investigations on Histone H2A-H2B Dynamics in the Nucleosome.
Lee J; Lee TH
Biochemistry; 2017 Feb; 56(7):977-985. PubMed ID: 28128545
[TBL] [Abstract][Full Text] [Related]
12. Unique Dynamics in Asymmetric macroH2A-H2A Hybrid Nucleosomes Result in Increased Complex Stability.
Bowerman S; Hickok RJ; Wereszczynski J
J Phys Chem B; 2019 Jan; 123(2):419-427. PubMed ID: 30557018
[TBL] [Abstract][Full Text] [Related]
13. Unwrapping of nucleosomal DNA ends: a multiscale molecular dynamics study.
Voltz K; Trylska J; Calimet N; Smith JC; Langowski J
Biophys J; 2012 Feb; 102(4):849-58. PubMed ID: 22385856
[TBL] [Abstract][Full Text] [Related]
14. Rapid spontaneous accessibility of nucleosomal DNA.
Li G; Levitus M; Bustamante C; Widom J
Nat Struct Mol Biol; 2005 Jan; 12(1):46-53. PubMed ID: 15580276
[TBL] [Abstract][Full Text] [Related]
15. Free energy profile for unwrapping outer superhelical turn of CENP-A nucleosome.
Kono H; Sakuraba S; Ishida H
Biophys Physicobiol; 2019; 16():337-343. PubMed ID: 31984189
[TBL] [Abstract][Full Text] [Related]
16. A lattice model for transcription factor access to nucleosomal DNA.
Teif VB; Ettig R; Rippe K
Biophys J; 2010 Oct; 99(8):2597-607. PubMed ID: 20959101
[TBL] [Abstract][Full Text] [Related]
17. Characterization of nucleosome unwrapping within chromatin fibers using magnetic tweezers.
Chien FT; van der Heijden T
Biophys J; 2014 Jul; 107(2):373-383. PubMed ID: 25028879
[TBL] [Abstract][Full Text] [Related]
18. Asymmetric unwrapping of nucleosomes under tension directed by DNA local flexibility.
Ngo TT; Zhang Q; Zhou R; Yodh JG; Ha T
Cell; 2015 Mar; 160(6):1135-44. PubMed ID: 25768909
[TBL] [Abstract][Full Text] [Related]
19. Asymmetric breathing motions of nucleosomal DNA and the role of histone tails.
Chakraborty K; Loverde SM
J Chem Phys; 2017 Aug; 147(6):065101. PubMed ID: 28810797
[TBL] [Abstract][Full Text] [Related]
20. Multiscale modeling of nucleosome dynamics.
Sharma S; Ding F; Dokholyan NV
Biophys J; 2007 Mar; 92(5):1457-70. PubMed ID: 17142268
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]