196 related articles for article (PubMed ID: 33600011)
1. MutSpliceDB: A database of splice sites variants with RNA-seq based evidence on effects on splicing.
Palmisano A; Vural S; Zhao Y; Sonkin D
Hum Mutat; 2021 Apr; 42(4):342-345. PubMed ID: 33600011
[TBL] [Abstract][Full Text] [Related]
2. Genome-wide analyses supported by RNA-Seq reveal non-canonical splice sites in plant genomes.
Pucker B; Brockington SF
BMC Genomics; 2018 Dec; 19(1):980. PubMed ID: 30594132
[TBL] [Abstract][Full Text] [Related]
3. Transcriptome-Wide Detection of Intron/Exon Definition in the Endogenous Pre-mRNA Transcripts of Mammalian Cells and Its Regulation by Depolarization.
Liu L; Das U; Ogunsola S; Xie J
Int J Mol Sci; 2022 Sep; 23(17):. PubMed ID: 36077555
[TBL] [Abstract][Full Text] [Related]
4. Base-specific mutational intolerance near splice sites clarifies the role of nonessential splice nucleotides.
Zhang S; Samocha KE; Rivas MA; Karczewski KJ; Daly E; Schmandt B; Neale BM; MacArthur DG; Daly MJ
Genome Res; 2018 Jul; 28(7):968-974. PubMed ID: 29858273
[TBL] [Abstract][Full Text] [Related]
5. SPLICE-q: a Python tool for genome-wide quantification of splicing efficiency.
de Melo Costa VR; Pfeuffer J; Louloupi A; Ørom UAV; Piro RM
BMC Bioinformatics; 2021 Jul; 22(1):368. PubMed ID: 34266387
[TBL] [Abstract][Full Text] [Related]
6. Splicing of constitutive upstream introns is essential for the recognition of intra-exonic suboptimal splice sites in the thrombopoietin gene.
Romano M; Marcucci R; Baralle FE
Nucleic Acids Res; 2001 Feb; 29(4):886-94. PubMed ID: 11160920
[TBL] [Abstract][Full Text] [Related]
7. Novel ANO5 intronic Roma variant alters splicing causing muscular dystrophy.
Mavillard F; Servián-Morilla E; Rivas E; Paradas C; Cabrera-Serrano M
Clin Genet; 2021 Jul; 100(1):106-110. PubMed ID: 33818761
[TBL] [Abstract][Full Text] [Related]
8. Splicing Enhancers at Intron-Exon Borders Participate in Acceptor Splice Sites Recognition.
Kováčová T; Souček P; Hujová P; Freiberger T; Grodecká L
Int J Mol Sci; 2020 Sep; 21(18):. PubMed ID: 32911621
[TBL] [Abstract][Full Text] [Related]
9. Compensatory relationship between splice sites and exonic splicing signals depending on the length of vertebrate introns.
Dewey CN; Rogozin IB; Koonin EV
BMC Genomics; 2006 Dec; 7():311. PubMed ID: 17156453
[TBL] [Abstract][Full Text] [Related]
10. BAP1 missense mutation c.2054 A>T (p.E685V) completely disrupts normal splicing through creation of a novel 5' splice site in a human mesothelioma cell line.
Morrison A; Chekaluk Y; Bacares R; Ladanyi M; Zhang L
PLoS One; 2015; 10(4):e0119224. PubMed ID: 25830670
[TBL] [Abstract][Full Text] [Related]
11. Splicing mutations in inherited retinal diseases.
Weisschuh N; Buena-Atienza E; Wissinger B
Prog Retin Eye Res; 2021 Jan; 80():100874. PubMed ID: 32553897
[TBL] [Abstract][Full Text] [Related]
12. SNPlice: variants that modulate Intron retention from RNA-sequencing data.
Mudvari P; Movassagh M; Kowsari K; Seyfi A; Kokkinaki M; Edwards NJ; Golestaneh N; Horvath A
Bioinformatics; 2015 Apr; 31(8):1191-8. PubMed ID: 25481010
[TBL] [Abstract][Full Text] [Related]
13. RNA-Seq Analysis of Differential Splice Junction Usage and Intron Retentions by DEXSeq.
Li Y; Rao X; Mattox WW; Amos CI; Liu B
PLoS One; 2015; 10(9):e0136653. PubMed ID: 26327458
[TBL] [Abstract][Full Text] [Related]
14. Clinical Characteristics of
Weisschuh N; Mazzola P; Bertrand M; Haack TB; Wissinger B; Kohl S; Stingl K
Int J Mol Sci; 2021 May; 22(10):. PubMed ID: 34065499
[TBL] [Abstract][Full Text] [Related]
15. All reported non-canonical splice site variants in GLA cause aberrant splicing.
Okada E; Horinouchi T; Yamamura T; Aoto Y; Suzuki R; Ichikawa Y; Tanaka Y; Masuda C; Kitakado H; Kondo A; Sakakibara N; Ishiko S; Nagano C; Ishimori S; Usui J; Yamagata K; Matsuo M; Nozu K
Clin Exp Nephrol; 2023 Sep; 27(9):737-746. PubMed ID: 37254000
[TBL] [Abstract][Full Text] [Related]
16. Systematic Minigene-Based Splicing Analysis and Tentative Clinical Classification of 52 CHEK2 Splice-Site Variants.
Sanoguera-Miralles L; Valenzuela-Palomo A; Bueno-Martínez E; Esteban-Sánchez A; Lorca V; Llinares-Burguet I; García-Álvarez A; Pérez-Segura P; Infante M; Easton DF; Devilee P; Vreeswijk MPG; de la Hoya M; Velasco-Sampedro EA
Clin Chem; 2024 Jan; 70(1):319-338. PubMed ID: 37725924
[TBL] [Abstract][Full Text] [Related]
17. Recursive splicing discovery using lariats in total RNA sequencing.
Hoppe ER; Udy DB; Bradley RK
Life Sci Alliance; 2023 Jul; 6(7):. PubMed ID: 37137707
[TBL] [Abstract][Full Text] [Related]
18. Predicting Splicing from Primary Sequence with Deep Learning.
Jaganathan K; Kyriazopoulou Panagiotopoulou S; McRae JF; Darbandi SF; Knowles D; Li YI; Kosmicki JA; Arbelaez J; Cui W; Schwartz GB; Chow ED; Kanterakis E; Gao H; Kia A; Batzoglou S; Sanders SJ; Farh KK
Cell; 2019 Jan; 176(3):535-548.e24. PubMed ID: 30661751
[TBL] [Abstract][Full Text] [Related]
19. Empirical prediction of variant-activated cryptic splice donors using population-based RNA-Seq data.
Dawes R; Joshi H; Cooper ST
Nat Commun; 2022 Mar; 13(1):1655. PubMed ID: 35351883
[TBL] [Abstract][Full Text] [Related]
20. Exonization of transposed elements: A challenge and opportunity for evolution.
Schmitz J; Brosius J
Biochimie; 2011 Nov; 93(11):1928-34. PubMed ID: 21787833
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]