These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

135 related articles for article (PubMed ID: 33693546)

  • 41. RTNsurvival: an R/Bioconductor package for regulatory network survival analysis.
    Groeneveld CS; Chagas VS; Jones SJM; Robertson AG; Ponder BAJ; Meyer KB; Castro MAA
    Bioinformatics; 2019 Nov; 35(21):4488-4489. PubMed ID: 30923832
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Identifying cancer pathway dysregulations using differential causal effects.
    Jablonski KP; Pirkl M; Ćevid D; Bühlmann P; Beerenwinkel N
    Bioinformatics; 2022 Mar; 38(6):1550-1559. PubMed ID: 34927666
    [TBL] [Abstract][Full Text] [Related]  

  • 43. chimeraviz: a tool for visualizing chimeric RNA.
    Lågstad S; Zhao S; Hoff AM; Johannessen B; Lingjærde OC; Skotheim RI
    Bioinformatics; 2017 Sep; 33(18):2954-2956. PubMed ID: 28525538
    [TBL] [Abstract][Full Text] [Related]  

  • 44. HDTD: analyzing multi-tissue gene expression data.
    Touloumis A; Marioni JC; Tavaré S
    Bioinformatics; 2016 Jul; 32(14):2193-5. PubMed ID: 27266441
    [TBL] [Abstract][Full Text] [Related]  

  • 45. ABAEnrichment: an R package to test for gene set expression enrichment in the adult and developing human brain.
    Grote S; Prüfer K; Kelso J; Dannemann M
    Bioinformatics; 2016 Oct; 32(20):3201-3203. PubMed ID: 27354695
    [TBL] [Abstract][Full Text] [Related]  

  • 46. Detection of rare disease variants in extended pedigrees using RVS.
    Sherman T; Fu J; Scharpf RB; Bureau A; Ruczinski I
    Bioinformatics; 2019 Jul; 35(14):2509-2511. PubMed ID: 30500888
    [TBL] [Abstract][Full Text] [Related]  

  • 47. scanMiR: a biochemically based toolkit for versatile and efficient microRNA target prediction.
    Soutschek M; Gross F; Schratt G; Germain PL
    Bioinformatics; 2022 Apr; 38(9):2466-2473. PubMed ID: 35188178
    [TBL] [Abstract][Full Text] [Related]  

  • 48. Girafe--an R/Bioconductor package for functional exploration of aligned next-generation sequencing reads.
    Toedling J; Ciaudo C; Voinnet O; Heard E; Barillot E
    Bioinformatics; 2010 Nov; 26(22):2902-3. PubMed ID: 20861030
    [TBL] [Abstract][Full Text] [Related]  

  • 49. ipDMR: identification of differentially methylated regions with interval P-values.
    Xu Z; Xie C; Taylor JA; Niu L
    Bioinformatics; 2021 May; 37(5):711-713. PubMed ID: 32805005
    [TBL] [Abstract][Full Text] [Related]  

  • 50. VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants.
    Obenchain V; Lawrence M; Carey V; Gogarten S; Shannon P; Morgan M
    Bioinformatics; 2014 Jul; 30(14):2076-8. PubMed ID: 24681907
    [TBL] [Abstract][Full Text] [Related]  

  • 51. runibic: a Bioconductor package for parallel row-based biclustering of gene expression data.
    Orzechowski P; Panszczyk A; Huang X; Moore JH
    Bioinformatics; 2018 Dec; 34(24):4302-4304. PubMed ID: 29939213
    [TBL] [Abstract][Full Text] [Related]  

  • 52. AffyRNADegradation: control and correction of RNA quality effects in GeneChip expression data.
    Fasold M; Binder H
    Bioinformatics; 2013 Jan; 29(1):129-31. PubMed ID: 23097420
    [TBL] [Abstract][Full Text] [Related]  

  • 53. ClassifyR: an R package for performance assessment of classification with applications to transcriptomics.
    Strbenac D; Mann GJ; Ormerod JT; Yang JY
    Bioinformatics; 2015 Jun; 31(11):1851-3. PubMed ID: 25644269
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays.
    Aryee MJ; Jaffe AE; Corrada-Bravo H; Ladd-Acosta C; Feinberg AP; Hansen KD; Irizarry RA
    Bioinformatics; 2014 May; 30(10):1363-9. PubMed ID: 24478339
    [TBL] [Abstract][Full Text] [Related]  

  • 55. Combining dependent P-values with an empirical adaptation of Brown's method.
    Poole W; Gibbs DL; Shmulevich I; Bernard B; Knijnenburg TA
    Bioinformatics; 2016 Sep; 32(17):i430-i436. PubMed ID: 27587659
    [TBL] [Abstract][Full Text] [Related]  

  • 56. esATAC: an easy-to-use systematic pipeline for ATAC-seq data analysis.
    Wei Z; Zhang W; Fang H; Li Y; Wang X
    Bioinformatics; 2018 Aug; 34(15):2664-2665. PubMed ID: 29522192
    [TBL] [Abstract][Full Text] [Related]  

  • 57. TreeAndLeaf: an R/Bioconductor package for graphs and trees with focus on the leaves.
    Cardoso MA; Rizzardi LEA; Kume LW; Groeneveld CS; Trefflich S; Morais DAA; Dalmolin RJS; Ponder BAJ; Meyer KB; Castro MAA
    Bioinformatics; 2022 Feb; 38(5):1463-1464. PubMed ID: 34864914
    [TBL] [Abstract][Full Text] [Related]  

  • 58. BayesPeak--an R package for analysing ChIP-seq data.
    Cairns J; Spyrou C; Stark R; Smith ML; Lynch AG; Tavaré S
    Bioinformatics; 2011 Mar; 27(5):713-4. PubMed ID: 21245054
    [TBL] [Abstract][Full Text] [Related]  

  • 59. Generalized empirical Bayesian methods for discovery of differential data in high-throughput biology.
    Hardcastle TJ
    Bioinformatics; 2016 Jan; 32(2):195-202. PubMed ID: 26428289
    [TBL] [Abstract][Full Text] [Related]  

  • 60. StructuralVariantAnnotation: a R/Bioconductor foundation for a caller-agnostic structural variant software ecosystem.
    Cameron DL; Dong R; Papenfuss AT
    Bioinformatics; 2022 Mar; 38(7):2046-2048. PubMed ID: 35134827
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.